Major module / path restructure, timm.models.layers -> timm.layers, add _ prefix to all non model modules in timm.models
Ross Wightman
2 years ago
parent
da6644b6ba
commit
927f031293
@ -1,4 +1,3 @@
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dependencies = ['torch']
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from timm.models import registry
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globals().update(registry._model_entrypoints)
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import timm
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globals().update(timm.models._registry._model_entrypoints)
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@ -1,4 +1,4 @@
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from .version import __version__
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from .layers import is_scriptable, is_exportable, set_scriptable, set_exportable
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from .models import create_model, list_models, list_pretrained, is_model, list_modules, model_entrypoint, \
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is_scriptable, is_exportable, set_scriptable, set_exportable, \
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is_model_pretrained, get_pretrained_cfg, get_pretrained_cfg_value
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@ -0,0 +1,44 @@
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from .activations import *
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from .adaptive_avgmax_pool import \
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adaptive_avgmax_pool2d, select_adaptive_pool2d, AdaptiveAvgMaxPool2d, SelectAdaptivePool2d
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from .blur_pool import BlurPool2d
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from .classifier import ClassifierHead, create_classifier
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from .cond_conv2d import CondConv2d, get_condconv_initializer
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from .config import is_exportable, is_scriptable, is_no_jit, set_exportable, set_scriptable, set_no_jit,\
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set_layer_config
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from .conv2d_same import Conv2dSame, conv2d_same
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from .conv_bn_act import ConvNormAct, ConvNormActAa, ConvBnAct
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from .create_act import create_act_layer, get_act_layer, get_act_fn
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from .create_attn import get_attn, create_attn
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from .create_conv2d import create_conv2d
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from .create_norm import get_norm_layer, create_norm_layer
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from .create_norm_act import get_norm_act_layer, create_norm_act_layer, get_norm_act_layer
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from .drop import DropBlock2d, DropPath, drop_block_2d, drop_path
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from .eca import EcaModule, CecaModule, EfficientChannelAttn, CircularEfficientChannelAttn
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from .evo_norm import EvoNorm2dB0, EvoNorm2dB1, EvoNorm2dB2,\
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EvoNorm2dS0, EvoNorm2dS0a, EvoNorm2dS1, EvoNorm2dS1a, EvoNorm2dS2, EvoNorm2dS2a
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from .fast_norm import is_fast_norm, set_fast_norm, fast_group_norm, fast_layer_norm
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from .filter_response_norm import FilterResponseNormTlu2d, FilterResponseNormAct2d
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from .gather_excite import GatherExcite
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from .global_context import GlobalContext
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from .helpers import to_ntuple, to_2tuple, to_3tuple, to_4tuple, make_divisible, extend_tuple
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from .inplace_abn import InplaceAbn
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from .linear import Linear
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from .mixed_conv2d import MixedConv2d
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from .mlp import Mlp, GluMlp, GatedMlp, ConvMlp
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from .non_local_attn import NonLocalAttn, BatNonLocalAttn
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from .norm import GroupNorm, GroupNorm1, LayerNorm, LayerNorm2d
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from .norm_act import BatchNormAct2d, GroupNormAct, convert_sync_batchnorm
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from .padding import get_padding, get_same_padding, pad_same
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from .patch_embed import PatchEmbed
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from .pool2d_same import AvgPool2dSame, create_pool2d
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from .squeeze_excite import SEModule, SqueezeExcite, EffectiveSEModule, EffectiveSqueezeExcite
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from .selective_kernel import SelectiveKernel
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from .separable_conv import SeparableConv2d, SeparableConvNormAct
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from .space_to_depth import SpaceToDepthModule
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from .split_attn import SplitAttn
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from .split_batchnorm import SplitBatchNorm2d, convert_splitbn_model
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from .std_conv import StdConv2d, StdConv2dSame, ScaledStdConv2d, ScaledStdConv2dSame
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from .test_time_pool import TestTimePoolHead, apply_test_time_pool
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from .trace_utils import _assert, _float_to_int
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from .weight_init import trunc_normal_, trunc_normal_tf_, variance_scaling_, lecun_normal_
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@ -0,0 +1,395 @@
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import dataclasses
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import logging
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from copy import deepcopy
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from typing import Optional, Dict, Callable, Any, Tuple
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from torch import nn as nn
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from torch.hub import load_state_dict_from_url
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from timm.models._features import FeatureListNet, FeatureHookNet
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from timm.models._features_fx import FeatureGraphNet
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from timm.models._helpers import load_state_dict
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from timm.models._hub import has_hf_hub, download_cached_file, load_state_dict_from_hf
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from timm.models._manipulate import adapt_input_conv
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from timm.models._pretrained import PretrainedCfg
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from timm.models._prune import adapt_model_from_file
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from timm.models._registry import get_pretrained_cfg
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_logger = logging.getLogger(__name__)
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# Global variables for rarely used pretrained checkpoint download progress and hash check.
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# Use set_pretrained_download_progress / set_pretrained_check_hash functions to toggle.
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_DOWNLOAD_PROGRESS = False
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_CHECK_HASH = False
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def _resolve_pretrained_source(pretrained_cfg):
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cfg_source = pretrained_cfg.get('source', '')
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pretrained_url = pretrained_cfg.get('url', None)
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pretrained_file = pretrained_cfg.get('file', None)
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hf_hub_id = pretrained_cfg.get('hf_hub_id', None)
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# resolve where to load pretrained weights from
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load_from = ''
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pretrained_loc = ''
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if cfg_source == 'hf-hub' and has_hf_hub(necessary=True):
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# hf-hub specified as source via model identifier
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load_from = 'hf-hub'
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assert hf_hub_id
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pretrained_loc = hf_hub_id
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else:
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# default source == timm or unspecified
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if pretrained_file:
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load_from = 'file'
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pretrained_loc = pretrained_file
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elif pretrained_url:
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load_from = 'url'
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pretrained_loc = pretrained_url
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elif hf_hub_id and has_hf_hub(necessary=True):
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# hf-hub available as alternate weight source in default_cfg
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load_from = 'hf-hub'
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pretrained_loc = hf_hub_id
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if load_from == 'hf-hub' and pretrained_cfg.get('hf_hub_filename', None):
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# if a filename override is set, return tuple for location w/ (hub_id, filename)
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pretrained_loc = pretrained_loc, pretrained_cfg['hf_hub_filename']
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return load_from, pretrained_loc
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def set_pretrained_download_progress(enable=True):
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""" Set download progress for pretrained weights on/off (globally). """
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global _DOWNLOAD_PROGRESS
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_DOWNLOAD_PROGRESS = enable
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def set_pretrained_check_hash(enable=True):
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""" Set hash checking for pretrained weights on/off (globally). """
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global _CHECK_HASH
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_CHECK_HASH = enable
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def load_custom_pretrained(
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model: nn.Module,
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pretrained_cfg: Optional[Dict] = None,
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load_fn: Optional[Callable] = None,
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):
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r"""Loads a custom (read non .pth) weight file
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Downloads checkpoint file into cache-dir like torch.hub based loaders, but calls
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a passed in custom load fun, or the `load_pretrained` model member fn.
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If the object is already present in `model_dir`, it's deserialized and returned.
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The default value of `model_dir` is ``<hub_dir>/checkpoints`` where
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`hub_dir` is the directory returned by :func:`~torch.hub.get_dir`.
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Args:
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model: The instantiated model to load weights into
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pretrained_cfg (dict): Default pretrained model cfg
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load_fn: An external standalone fn that loads weights into provided model, otherwise a fn named
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'laod_pretrained' on the model will be called if it exists
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"""
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pretrained_cfg = pretrained_cfg or getattr(model, 'pretrained_cfg', None)
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if not pretrained_cfg:
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_logger.warning("Invalid pretrained config, cannot load weights.")
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return
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load_from, pretrained_loc = _resolve_pretrained_source(pretrained_cfg)
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if not load_from:
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_logger.warning("No pretrained weights exist for this model. Using random initialization.")
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return
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if load_from == 'hf-hub': # FIXME
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_logger.warning("Hugging Face hub not currently supported for custom load pretrained models.")
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elif load_from == 'url':
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pretrained_loc = download_cached_file(
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pretrained_loc,
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check_hash=_CHECK_HASH,
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progress=_DOWNLOAD_PROGRESS
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)
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if load_fn is not None:
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load_fn(model, pretrained_loc)
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elif hasattr(model, 'load_pretrained'):
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model.load_pretrained(pretrained_loc)
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else:
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_logger.warning("Valid function to load pretrained weights is not available, using random initialization.")
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def load_pretrained(
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model: nn.Module,
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pretrained_cfg: Optional[Dict] = None,
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num_classes: int = 1000,
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in_chans: int = 3,
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filter_fn: Optional[Callable] = None,
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strict: bool = True,
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):
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""" Load pretrained checkpoint
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Args:
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model (nn.Module) : PyTorch model module
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pretrained_cfg (Optional[Dict]): configuration for pretrained weights / target dataset
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num_classes (int): num_classes for target model
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in_chans (int): in_chans for target model
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filter_fn (Optional[Callable]): state_dict filter fn for load (takes state_dict, model as args)
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strict (bool): strict load of checkpoint
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"""
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pretrained_cfg = pretrained_cfg or getattr(model, 'pretrained_cfg', None)
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if not pretrained_cfg:
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_logger.warning("Invalid pretrained config, cannot load weights.")
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return
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load_from, pretrained_loc = _resolve_pretrained_source(pretrained_cfg)
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if load_from == 'file':
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_logger.info(f'Loading pretrained weights from file ({pretrained_loc})')
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state_dict = load_state_dict(pretrained_loc)
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elif load_from == 'url':
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_logger.info(f'Loading pretrained weights from url ({pretrained_loc})')
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state_dict = load_state_dict_from_url(
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pretrained_loc,
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map_location='cpu',
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progress=_DOWNLOAD_PROGRESS,
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check_hash=_CHECK_HASH,
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)
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elif load_from == 'hf-hub':
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_logger.info(f'Loading pretrained weights from Hugging Face hub ({pretrained_loc})')
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if isinstance(pretrained_loc, (list, tuple)):
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state_dict = load_state_dict_from_hf(*pretrained_loc)
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else:
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state_dict = load_state_dict_from_hf(pretrained_loc)
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else:
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_logger.warning("No pretrained weights exist or were found for this model. Using random initialization.")
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return
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if filter_fn is not None:
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# for backwards compat with filter fn that take one arg, try one first, the two
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try:
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state_dict = filter_fn(state_dict)
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except TypeError:
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state_dict = filter_fn(state_dict, model)
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input_convs = pretrained_cfg.get('first_conv', None)
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if input_convs is not None and in_chans != 3:
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if isinstance(input_convs, str):
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input_convs = (input_convs,)
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for input_conv_name in input_convs:
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weight_name = input_conv_name + '.weight'
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try:
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state_dict[weight_name] = adapt_input_conv(in_chans, state_dict[weight_name])
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_logger.info(
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f'Converted input conv {input_conv_name} pretrained weights from 3 to {in_chans} channel(s)')
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except NotImplementedError as e:
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del state_dict[weight_name]
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strict = False
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_logger.warning(
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f'Unable to convert pretrained {input_conv_name} weights, using random init for this layer.')
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classifiers = pretrained_cfg.get('classifier', None)
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label_offset = pretrained_cfg.get('label_offset', 0)
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if classifiers is not None:
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if isinstance(classifiers, str):
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classifiers = (classifiers,)
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if num_classes != pretrained_cfg['num_classes']:
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for classifier_name in classifiers:
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# completely discard fully connected if model num_classes doesn't match pretrained weights
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state_dict.pop(classifier_name + '.weight', None)
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state_dict.pop(classifier_name + '.bias', None)
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strict = False
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elif label_offset > 0:
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for classifier_name in classifiers:
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# special case for pretrained weights with an extra background class in pretrained weights
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classifier_weight = state_dict[classifier_name + '.weight']
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state_dict[classifier_name + '.weight'] = classifier_weight[label_offset:]
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classifier_bias = state_dict[classifier_name + '.bias']
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state_dict[classifier_name + '.bias'] = classifier_bias[label_offset:]
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model.load_state_dict(state_dict, strict=strict)
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def pretrained_cfg_for_features(pretrained_cfg):
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pretrained_cfg = deepcopy(pretrained_cfg)
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# remove default pretrained cfg fields that don't have much relevance for feature backbone
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to_remove = ('num_classes', 'classifier', 'global_pool') # add default final pool size?
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for tr in to_remove:
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pretrained_cfg.pop(tr, None)
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return pretrained_cfg
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def _filter_kwargs(kwargs, names):
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if not kwargs or not names:
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return
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for n in names:
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kwargs.pop(n, None)
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def _update_default_kwargs(pretrained_cfg, kwargs, kwargs_filter):
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""" Update the default_cfg and kwargs before passing to model
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Args:
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pretrained_cfg: input pretrained cfg (updated in-place)
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kwargs: keyword args passed to model build fn (updated in-place)
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kwargs_filter: keyword arg keys that must be removed before model __init__
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"""
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# Set model __init__ args that can be determined by default_cfg (if not already passed as kwargs)
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default_kwarg_names = ('num_classes', 'global_pool', 'in_chans')
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if pretrained_cfg.get('fixed_input_size', False):
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# if fixed_input_size exists and is True, model takes an img_size arg that fixes its input size
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default_kwarg_names += ('img_size',)
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for n in default_kwarg_names:
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# for legacy reasons, model __init__args uses img_size + in_chans as separate args while
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# pretrained_cfg has one input_size=(C, H ,W) entry
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if n == 'img_size':
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input_size = pretrained_cfg.get('input_size', None)
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if input_size is not None:
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assert len(input_size) == 3
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kwargs.setdefault(n, input_size[-2:])
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elif n == 'in_chans':
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input_size = pretrained_cfg.get('input_size', None)
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if input_size is not None:
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assert len(input_size) == 3
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kwargs.setdefault(n, input_size[0])
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else:
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default_val = pretrained_cfg.get(n, None)
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if default_val is not None:
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kwargs.setdefault(n, pretrained_cfg[n])
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# Filter keyword args for task specific model variants (some 'features only' models, etc.)
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_filter_kwargs(kwargs, names=kwargs_filter)
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def resolve_pretrained_cfg(
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variant: str,
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pretrained_cfg=None,
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pretrained_cfg_overlay=None,
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) -> PretrainedCfg:
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model_with_tag = variant
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pretrained_tag = None
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if pretrained_cfg:
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if isinstance(pretrained_cfg, dict):
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# pretrained_cfg dict passed as arg, validate by converting to PretrainedCfg
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pretrained_cfg = PretrainedCfg(**pretrained_cfg)
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elif isinstance(pretrained_cfg, str):
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pretrained_tag = pretrained_cfg
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pretrained_cfg = None
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# fallback to looking up pretrained cfg in model registry by variant identifier
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if not pretrained_cfg:
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if pretrained_tag:
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model_with_tag = '.'.join([variant, pretrained_tag])
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pretrained_cfg = get_pretrained_cfg(model_with_tag)
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if not pretrained_cfg:
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_logger.warning(
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f"No pretrained configuration specified for {model_with_tag} model. Using a default."
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f" Please add a config to the model pretrained_cfg registry or pass explicitly.")
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pretrained_cfg = PretrainedCfg() # instance with defaults
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pretrained_cfg_overlay = pretrained_cfg_overlay or {}
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if not pretrained_cfg.architecture:
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pretrained_cfg_overlay.setdefault('architecture', variant)
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pretrained_cfg = dataclasses.replace(pretrained_cfg, **pretrained_cfg_overlay)
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return pretrained_cfg
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def build_model_with_cfg(
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model_cls: Callable,
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variant: str,
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pretrained: bool,
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pretrained_cfg: Optional[Dict] = None,
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pretrained_cfg_overlay: Optional[Dict] = None,
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model_cfg: Optional[Any] = None,
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feature_cfg: Optional[Dict] = None,
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pretrained_strict: bool = True,
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pretrained_filter_fn: Optional[Callable] = None,
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kwargs_filter: Optional[Tuple[str]] = None,
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**kwargs,
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):
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""" Build model with specified default_cfg and optional model_cfg
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This helper fn aids in the construction of a model including:
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* handling default_cfg and associated pretrained weight loading
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* passing through optional model_cfg for models with config based arch spec
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* features_only model adaptation
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* pruning config / model adaptation
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Args:
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model_cls (nn.Module): model class
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variant (str): model variant name
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pretrained (bool): load pretrained weights
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pretrained_cfg (dict): model's pretrained weight/task config
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model_cfg (Optional[Dict]): model's architecture config
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feature_cfg (Optional[Dict]: feature extraction adapter config
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pretrained_strict (bool): load pretrained weights strictly
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pretrained_filter_fn (Optional[Callable]): filter callable for pretrained weights
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kwargs_filter (Optional[Tuple]): kwargs to filter before passing to model
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**kwargs: model args passed through to model __init__
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"""
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pruned = kwargs.pop('pruned', False)
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features = False
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feature_cfg = feature_cfg or {}
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# resolve and update model pretrained config and model kwargs
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pretrained_cfg = resolve_pretrained_cfg(
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variant,
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pretrained_cfg=pretrained_cfg,
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pretrained_cfg_overlay=pretrained_cfg_overlay
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)
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# FIXME converting back to dict, PretrainedCfg use should be propagated further, but not into model
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pretrained_cfg = pretrained_cfg.to_dict()
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_update_default_kwargs(pretrained_cfg, kwargs, kwargs_filter)
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# Setup for feature extraction wrapper done at end of this fn
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if kwargs.pop('features_only', False):
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features = True
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feature_cfg.setdefault('out_indices', (0, 1, 2, 3, 4))
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if 'out_indices' in kwargs:
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feature_cfg['out_indices'] = kwargs.pop('out_indices')
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# Instantiate the model
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if model_cfg is None:
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model = model_cls(**kwargs)
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else:
|
||||
model = model_cls(cfg=model_cfg, **kwargs)
|
||||
model.pretrained_cfg = pretrained_cfg
|
||||
model.default_cfg = model.pretrained_cfg # alias for backwards compat
|
||||
|
||||
if pruned:
|
||||
model = adapt_model_from_file(model, variant)
|
||||
|
||||
# For classification models, check class attr, then kwargs, then default to 1k, otherwise 0 for feats
|
||||
num_classes_pretrained = 0 if features else getattr(model, 'num_classes', kwargs.get('num_classes', 1000))
|
||||
if pretrained:
|
||||
if pretrained_cfg.get('custom_load', False):
|
||||
load_custom_pretrained(
|
||||
model,
|
||||
pretrained_cfg=pretrained_cfg,
|
||||
)
|
||||
else:
|
||||
load_pretrained(
|
||||
model,
|
||||
pretrained_cfg=pretrained_cfg,
|
||||
num_classes=num_classes_pretrained,
|
||||
in_chans=kwargs.get('in_chans', 3),
|
||||
filter_fn=pretrained_filter_fn,
|
||||
strict=pretrained_strict,
|
||||
)
|
||||
|
||||
# Wrap the model in a feature extraction module if enabled
|
||||
if features:
|
||||
feature_cls = FeatureListNet
|
||||
if 'feature_cls' in feature_cfg:
|
||||
feature_cls = feature_cfg.pop('feature_cls')
|
||||
if isinstance(feature_cls, str):
|
||||
feature_cls = feature_cls.lower()
|
||||
if 'hook' in feature_cls:
|
||||
feature_cls = FeatureHookNet
|
||||
elif feature_cls == 'fx':
|
||||
feature_cls = FeatureGraphNet
|
||||
else:
|
||||
assert False, f'Unknown feature class {feature_cls}'
|
||||
model = feature_cls(model, **feature_cfg)
|
||||
model.pretrained_cfg = pretrained_cfg_for_features(pretrained_cfg) # add back default_cfg
|
||||
model.default_cfg = model.pretrained_cfg # alias for backwards compat
|
||||
|
||||
return model
|
||||
@ -0,0 +1,113 @@
|
||||
""" Model creation / weight loading / state_dict helpers
|
||||
|
||||
Hacked together by / Copyright 2020 Ross Wightman
|
||||
"""
|
||||
import logging
|
||||
import os
|
||||
from collections import OrderedDict
|
||||
|
||||
import torch
|
||||
|
||||
import timm.models._builder
|
||||
|
||||
_logger = logging.getLogger(__name__)
|
||||
|
||||
|
||||
def clean_state_dict(state_dict):
|
||||
# 'clean' checkpoint by removing .module prefix from state dict if it exists from parallel training
|
||||
cleaned_state_dict = OrderedDict()
|
||||
for k, v in state_dict.items():
|
||||
name = k[7:] if k.startswith('module.') else k
|
||||
cleaned_state_dict[name] = v
|
||||
return cleaned_state_dict
|
||||
|
||||
|
||||
def load_state_dict(checkpoint_path, use_ema=True):
|
||||
if checkpoint_path and os.path.isfile(checkpoint_path):
|
||||
checkpoint = torch.load(checkpoint_path, map_location='cpu')
|
||||
state_dict_key = ''
|
||||
if isinstance(checkpoint, dict):
|
||||
if use_ema and checkpoint.get('state_dict_ema', None) is not None:
|
||||
state_dict_key = 'state_dict_ema'
|
||||
elif use_ema and checkpoint.get('model_ema', None) is not None:
|
||||
state_dict_key = 'model_ema'
|
||||
elif 'state_dict' in checkpoint:
|
||||
state_dict_key = 'state_dict'
|
||||
elif 'model' in checkpoint:
|
||||
state_dict_key = 'model'
|
||||
state_dict = clean_state_dict(checkpoint[state_dict_key] if state_dict_key else checkpoint)
|
||||
_logger.info("Loaded {} from checkpoint '{}'".format(state_dict_key, checkpoint_path))
|
||||
return state_dict
|
||||
else:
|
||||
_logger.error("No checkpoint found at '{}'".format(checkpoint_path))
|
||||
raise FileNotFoundError()
|
||||
|
||||
|
||||
def load_checkpoint(model, checkpoint_path, use_ema=True, strict=True, remap=False):
|
||||
if os.path.splitext(checkpoint_path)[-1].lower() in ('.npz', '.npy'):
|
||||
# numpy checkpoint, try to load via model specific load_pretrained fn
|
||||
if hasattr(model, 'load_pretrained'):
|
||||
timm.models._model_builder.load_pretrained(checkpoint_path)
|
||||
else:
|
||||
raise NotImplementedError('Model cannot load numpy checkpoint')
|
||||
return
|
||||
state_dict = load_state_dict(checkpoint_path, use_ema)
|
||||
if remap:
|
||||
state_dict = remap_checkpoint(model, state_dict)
|
||||
incompatible_keys = model.load_state_dict(state_dict, strict=strict)
|
||||
return incompatible_keys
|
||||
|
||||
|
||||
def remap_checkpoint(model, state_dict, allow_reshape=True):
|
||||
""" remap checkpoint by iterating over state dicts in order (ignoring original keys).
|
||||
This assumes models (and originating state dict) were created with params registered in same order.
|
||||
"""
|
||||
out_dict = {}
|
||||
for (ka, va), (kb, vb) in zip(model.state_dict().items(), state_dict.items()):
|
||||
assert va.numel == vb.numel, f'Tensor size mismatch {ka}: {va.shape} vs {kb}: {vb.shape}. Remap failed.'
|
||||
if va.shape != vb.shape:
|
||||
if allow_reshape:
|
||||
vb = vb.reshape(va.shape)
|
||||
else:
|
||||
assert False, f'Tensor shape mismatch {ka}: {va.shape} vs {kb}: {vb.shape}. Remap failed.'
|
||||
out_dict[ka] = vb
|
||||
return out_dict
|
||||
|
||||
|
||||
def resume_checkpoint(model, checkpoint_path, optimizer=None, loss_scaler=None, log_info=True):
|
||||
resume_epoch = None
|
||||
if os.path.isfile(checkpoint_path):
|
||||
checkpoint = torch.load(checkpoint_path, map_location='cpu')
|
||||
if isinstance(checkpoint, dict) and 'state_dict' in checkpoint:
|
||||
if log_info:
|
||||
_logger.info('Restoring model state from checkpoint...')
|
||||
state_dict = clean_state_dict(checkpoint['state_dict'])
|
||||
model.load_state_dict(state_dict)
|
||||
|
||||
if optimizer is not None and 'optimizer' in checkpoint:
|
||||
if log_info:
|
||||
_logger.info('Restoring optimizer state from checkpoint...')
|
||||
optimizer.load_state_dict(checkpoint['optimizer'])
|
||||
|
||||
if loss_scaler is not None and loss_scaler.state_dict_key in checkpoint:
|
||||
if log_info:
|
||||
_logger.info('Restoring AMP loss scaler state from checkpoint...')
|
||||
loss_scaler.load_state_dict(checkpoint[loss_scaler.state_dict_key])
|
||||
|
||||
if 'epoch' in checkpoint:
|
||||
resume_epoch = checkpoint['epoch']
|
||||
if 'version' in checkpoint and checkpoint['version'] > 1:
|
||||
resume_epoch += 1 # start at the next epoch, old checkpoints incremented before save
|
||||
|
||||
if log_info:
|
||||
_logger.info("Loaded checkpoint '{}' (epoch {})".format(checkpoint_path, checkpoint['epoch']))
|
||||
else:
|
||||
model.load_state_dict(checkpoint)
|
||||
if log_info:
|
||||
_logger.info("Loaded checkpoint '{}'".format(checkpoint_path))
|
||||
return resume_epoch
|
||||
else:
|
||||
_logger.error("No checkpoint found at '{}'".format(checkpoint_path))
|
||||
raise FileNotFoundError()
|
||||
|
||||
|
||||
@ -0,0 +1,255 @@
|
||||
import collections.abc
|
||||
import math
|
||||
import re
|
||||
from collections import defaultdict
|
||||
from itertools import chain
|
||||
from typing import Callable, Union, Dict
|
||||
|
||||
import torch
|
||||
from torch import nn as nn
|
||||
from torch.utils.checkpoint import checkpoint
|
||||
|
||||
|
||||
def model_parameters(model, exclude_head=False):
|
||||
if exclude_head:
|
||||
# FIXME this a bit of a quick and dirty hack to skip classifier head params based on ordering
|
||||
return [p for p in model.parameters()][:-2]
|
||||
else:
|
||||
return model.parameters()
|
||||
|
||||
|
||||
def named_apply(fn: Callable, module: nn.Module, name='', depth_first=True, include_root=False) -> nn.Module:
|
||||
if not depth_first and include_root:
|
||||
fn(module=module, name=name)
|
||||
for child_name, child_module in module.named_children():
|
||||
child_name = '.'.join((name, child_name)) if name else child_name
|
||||
named_apply(fn=fn, module=child_module, name=child_name, depth_first=depth_first, include_root=True)
|
||||
if depth_first and include_root:
|
||||
fn(module=module, name=name)
|
||||
return module
|
||||
|
||||
|
||||
def named_modules(module: nn.Module, name='', depth_first=True, include_root=False):
|
||||
if not depth_first and include_root:
|
||||
yield name, module
|
||||
for child_name, child_module in module.named_children():
|
||||
child_name = '.'.join((name, child_name)) if name else child_name
|
||||
yield from named_modules(
|
||||
module=child_module, name=child_name, depth_first=depth_first, include_root=True)
|
||||
if depth_first and include_root:
|
||||
yield name, module
|
||||
|
||||
|
||||
def named_modules_with_params(module: nn.Module, name='', depth_first=True, include_root=False):
|
||||
if module._parameters and not depth_first and include_root:
|
||||
yield name, module
|
||||
for child_name, child_module in module.named_children():
|
||||
child_name = '.'.join((name, child_name)) if name else child_name
|
||||
yield from named_modules_with_params(
|
||||
module=child_module, name=child_name, depth_first=depth_first, include_root=True)
|
||||
if module._parameters and depth_first and include_root:
|
||||
yield name, module
|
||||
|
||||
|
||||
MATCH_PREV_GROUP = (99999,)
|
||||
|
||||
|
||||
def group_with_matcher(
|
||||
named_objects,
|
||||
group_matcher: Union[Dict, Callable],
|
||||
output_values: bool = False,
|
||||
reverse: bool = False
|
||||
):
|
||||
if isinstance(group_matcher, dict):
|
||||
# dictionary matcher contains a dict of raw-string regex expr that must be compiled
|
||||
compiled = []
|
||||
for group_ordinal, (group_name, mspec) in enumerate(group_matcher.items()):
|
||||
if mspec is None:
|
||||
continue
|
||||
# map all matching specifications into 3-tuple (compiled re, prefix, suffix)
|
||||
if isinstance(mspec, (tuple, list)):
|
||||
# multi-entry match specifications require each sub-spec to be a 2-tuple (re, suffix)
|
||||
for sspec in mspec:
|
||||
compiled += [(re.compile(sspec[0]), (group_ordinal,), sspec[1])]
|
||||
else:
|
||||
compiled += [(re.compile(mspec), (group_ordinal,), None)]
|
||||
group_matcher = compiled
|
||||
|
||||
def _get_grouping(name):
|
||||
if isinstance(group_matcher, (list, tuple)):
|
||||
for match_fn, prefix, suffix in group_matcher:
|
||||
r = match_fn.match(name)
|
||||
if r:
|
||||
parts = (prefix, r.groups(), suffix)
|
||||
# map all tuple elem to int for numeric sort, filter out None entries
|
||||
return tuple(map(float, chain.from_iterable(filter(None, parts))))
|
||||
return float('inf'), # un-matched layers (neck, head) mapped to largest ordinal
|
||||
else:
|
||||
ord = group_matcher(name)
|
||||
if not isinstance(ord, collections.abc.Iterable):
|
||||
return ord,
|
||||
return tuple(ord)
|
||||
|
||||
# map layers into groups via ordinals (ints or tuples of ints) from matcher
|
||||
grouping = defaultdict(list)
|
||||
for k, v in named_objects:
|
||||
grouping[_get_grouping(k)].append(v if output_values else k)
|
||||
|
||||
# remap to integers
|
||||
layer_id_to_param = defaultdict(list)
|
||||
lid = -1
|
||||
for k in sorted(filter(lambda x: x is not None, grouping.keys())):
|
||||
if lid < 0 or k[-1] != MATCH_PREV_GROUP[0]:
|
||||
lid += 1
|
||||
layer_id_to_param[lid].extend(grouping[k])
|
||||
|
||||
if reverse:
|
||||
assert not output_values, "reverse mapping only sensible for name output"
|
||||
# output reverse mapping
|
||||
param_to_layer_id = {}
|
||||
for lid, lm in layer_id_to_param.items():
|
||||
for n in lm:
|
||||
param_to_layer_id[n] = lid
|
||||
return param_to_layer_id
|
||||
|
||||
return layer_id_to_param
|
||||
|
||||
|
||||
def group_parameters(
|
||||
module: nn.Module,
|
||||
group_matcher,
|
||||
output_values=False,
|
||||
reverse=False,
|
||||
):
|
||||
return group_with_matcher(
|
||||
module.named_parameters(), group_matcher, output_values=output_values, reverse=reverse)
|
||||
|
||||
|
||||
def group_modules(
|
||||
module: nn.Module,
|
||||
group_matcher,
|
||||
output_values=False,
|
||||
reverse=False,
|
||||
):
|
||||
return group_with_matcher(
|
||||
named_modules_with_params(module), group_matcher, output_values=output_values, reverse=reverse)
|
||||
|
||||
|
||||
def flatten_modules(named_modules, depth=1, prefix='', module_types='sequential'):
|
||||
prefix_is_tuple = isinstance(prefix, tuple)
|
||||
if isinstance(module_types, str):
|
||||
if module_types == 'container':
|
||||
module_types = (nn.Sequential, nn.ModuleList, nn.ModuleDict)
|
||||
else:
|
||||
module_types = (nn.Sequential,)
|
||||
for name, module in named_modules:
|
||||
if depth and isinstance(module, module_types):
|
||||
yield from flatten_modules(
|
||||
module.named_children(),
|
||||
depth - 1,
|
||||
prefix=(name,) if prefix_is_tuple else name,
|
||||
module_types=module_types,
|
||||
)
|
||||
else:
|
||||
if prefix_is_tuple:
|
||||
name = prefix + (name,)
|
||||
yield name, module
|
||||
else:
|
||||
if prefix:
|
||||
name = '.'.join([prefix, name])
|
||||
yield name, module
|
||||
|
||||
|
||||
def checkpoint_seq(
|
||||
functions,
|
||||
x,
|
||||
every=1,
|
||||
flatten=False,
|
||||
skip_last=False,
|
||||
preserve_rng_state=True
|
||||
):
|
||||
r"""A helper function for checkpointing sequential models.
|
||||
|
||||
Sequential models execute a list of modules/functions in order
|
||||
(sequentially). Therefore, we can divide such a sequence into segments
|
||||
and checkpoint each segment. All segments except run in :func:`torch.no_grad`
|
||||
manner, i.e., not storing the intermediate activations. The inputs of each
|
||||
checkpointed segment will be saved for re-running the segment in the backward pass.
|
||||
|
||||
See :func:`~torch.utils.checkpoint.checkpoint` on how checkpointing works.
|
||||
|
||||
.. warning::
|
||||
Checkpointing currently only supports :func:`torch.autograd.backward`
|
||||
and only if its `inputs` argument is not passed. :func:`torch.autograd.grad`
|
||||
is not supported.
|
||||
|
||||
.. warning:
|
||||
At least one of the inputs needs to have :code:`requires_grad=True` if
|
||||
grads are needed for model inputs, otherwise the checkpointed part of the
|
||||
model won't have gradients.
|
||||
|
||||
Args:
|
||||
functions: A :class:`torch.nn.Sequential` or the list of modules or functions to run sequentially.
|
||||
x: A Tensor that is input to :attr:`functions`
|
||||
every: checkpoint every-n functions (default: 1)
|
||||
flatten (bool): flatten nn.Sequential of nn.Sequentials
|
||||
skip_last (bool): skip checkpointing the last function in the sequence if True
|
||||
preserve_rng_state (bool, optional, default=True): Omit stashing and restoring
|
||||
the RNG state during each checkpoint.
|
||||
|
||||
Returns:
|
||||
Output of running :attr:`functions` sequentially on :attr:`*inputs`
|
||||
|
||||
Example:
|
||||
>>> model = nn.Sequential(...)
|
||||
>>> input_var = checkpoint_seq(model, input_var, every=2)
|
||||
"""
|
||||
def run_function(start, end, functions):
|
||||
def forward(_x):
|
||||
for j in range(start, end + 1):
|
||||
_x = functions[j](_x)
|
||||
return _x
|
||||
return forward
|
||||
|
||||
if isinstance(functions, torch.nn.Sequential):
|
||||
functions = functions.children()
|
||||
if flatten:
|
||||
functions = chain.from_iterable(functions)
|
||||
if not isinstance(functions, (tuple, list)):
|
||||
functions = tuple(functions)
|
||||
|
||||
num_checkpointed = len(functions)
|
||||
if skip_last:
|
||||
num_checkpointed -= 1
|
||||
end = -1
|
||||
for start in range(0, num_checkpointed, every):
|
||||
end = min(start + every - 1, num_checkpointed - 1)
|
||||
x = checkpoint(run_function(start, end, functions), x, preserve_rng_state=preserve_rng_state)
|
||||
if skip_last:
|
||||
return run_function(end + 1, len(functions) - 1, functions)(x)
|
||||
return x
|
||||
|
||||
|
||||
def adapt_input_conv(in_chans, conv_weight):
|
||||
conv_type = conv_weight.dtype
|
||||
conv_weight = conv_weight.float() # Some weights are in torch.half, ensure it's float for sum on CPU
|
||||
O, I, J, K = conv_weight.shape
|
||||
if in_chans == 1:
|
||||
if I > 3:
|
||||
assert conv_weight.shape[1] % 3 == 0
|
||||
# For models with space2depth stems
|
||||
conv_weight = conv_weight.reshape(O, I // 3, 3, J, K)
|
||||
conv_weight = conv_weight.sum(dim=2, keepdim=False)
|
||||
else:
|
||||
conv_weight = conv_weight.sum(dim=1, keepdim=True)
|
||||
elif in_chans != 3:
|
||||
if I != 3:
|
||||
raise NotImplementedError('Weight format not supported by conversion.')
|
||||
else:
|
||||
# NOTE this strategy should be better than random init, but there could be other combinations of
|
||||
# the original RGB input layer weights that'd work better for specific cases.
|
||||
repeat = int(math.ceil(in_chans / 3))
|
||||
conv_weight = conv_weight.repeat(1, repeat, 1, 1)[:, :in_chans, :, :]
|
||||
conv_weight *= (3 / float(in_chans))
|
||||
conv_weight = conv_weight.to(conv_type)
|
||||
return conv_weight
|
||||
@ -0,0 +1,111 @@
|
||||
import os
|
||||
from copy import deepcopy
|
||||
|
||||
from torch import nn as nn
|
||||
|
||||
from timm.layers import Conv2dSame, BatchNormAct2d, Linear
|
||||
|
||||
|
||||
def extract_layer(model, layer):
|
||||
layer = layer.split('.')
|
||||
module = model
|
||||
if hasattr(model, 'module') and layer[0] != 'module':
|
||||
module = model.module
|
||||
if not hasattr(model, 'module') and layer[0] == 'module':
|
||||
layer = layer[1:]
|
||||
for l in layer:
|
||||
if hasattr(module, l):
|
||||
if not l.isdigit():
|
||||
module = getattr(module, l)
|
||||
else:
|
||||
module = module[int(l)]
|
||||
else:
|
||||
return module
|
||||
return module
|
||||
|
||||
|
||||
def set_layer(model, layer, val):
|
||||
layer = layer.split('.')
|
||||
module = model
|
||||
if hasattr(model, 'module') and layer[0] != 'module':
|
||||
module = model.module
|
||||
lst_index = 0
|
||||
module2 = module
|
||||
for l in layer:
|
||||
if hasattr(module2, l):
|
||||
if not l.isdigit():
|
||||
module2 = getattr(module2, l)
|
||||
else:
|
||||
module2 = module2[int(l)]
|
||||
lst_index += 1
|
||||
lst_index -= 1
|
||||
for l in layer[:lst_index]:
|
||||
if not l.isdigit():
|
||||
module = getattr(module, l)
|
||||
else:
|
||||
module = module[int(l)]
|
||||
l = layer[lst_index]
|
||||
setattr(module, l, val)
|
||||
|
||||
|
||||
def adapt_model_from_string(parent_module, model_string):
|
||||
separator = '***'
|
||||
state_dict = {}
|
||||
lst_shape = model_string.split(separator)
|
||||
for k in lst_shape:
|
||||
k = k.split(':')
|
||||
key = k[0]
|
||||
shape = k[1][1:-1].split(',')
|
||||
if shape[0] != '':
|
||||
state_dict[key] = [int(i) for i in shape]
|
||||
|
||||
new_module = deepcopy(parent_module)
|
||||
for n, m in parent_module.named_modules():
|
||||
old_module = extract_layer(parent_module, n)
|
||||
if isinstance(old_module, nn.Conv2d) or isinstance(old_module, Conv2dSame):
|
||||
if isinstance(old_module, Conv2dSame):
|
||||
conv = Conv2dSame
|
||||
else:
|
||||
conv = nn.Conv2d
|
||||
s = state_dict[n + '.weight']
|
||||
in_channels = s[1]
|
||||
out_channels = s[0]
|
||||
g = 1
|
||||
if old_module.groups > 1:
|
||||
in_channels = out_channels
|
||||
g = in_channels
|
||||
new_conv = conv(
|
||||
in_channels=in_channels, out_channels=out_channels, kernel_size=old_module.kernel_size,
|
||||
bias=old_module.bias is not None, padding=old_module.padding, dilation=old_module.dilation,
|
||||
groups=g, stride=old_module.stride)
|
||||
set_layer(new_module, n, new_conv)
|
||||
elif isinstance(old_module, BatchNormAct2d):
|
||||
new_bn = BatchNormAct2d(
|
||||
state_dict[n + '.weight'][0], eps=old_module.eps, momentum=old_module.momentum,
|
||||
affine=old_module.affine, track_running_stats=True)
|
||||
new_bn.drop = old_module.drop
|
||||
new_bn.act = old_module.act
|
||||
set_layer(new_module, n, new_bn)
|
||||
elif isinstance(old_module, nn.BatchNorm2d):
|
||||
new_bn = nn.BatchNorm2d(
|
||||
num_features=state_dict[n + '.weight'][0], eps=old_module.eps, momentum=old_module.momentum,
|
||||
affine=old_module.affine, track_running_stats=True)
|
||||
set_layer(new_module, n, new_bn)
|
||||
elif isinstance(old_module, nn.Linear):
|
||||
# FIXME extra checks to ensure this is actually the FC classifier layer and not a diff Linear layer?
|
||||
num_features = state_dict[n + '.weight'][1]
|
||||
new_fc = Linear(
|
||||
in_features=num_features, out_features=old_module.out_features, bias=old_module.bias is not None)
|
||||
set_layer(new_module, n, new_fc)
|
||||
if hasattr(new_module, 'num_features'):
|
||||
new_module.num_features = num_features
|
||||
new_module.eval()
|
||||
parent_module.eval()
|
||||
|
||||
return new_module
|
||||
|
||||
|
||||
def adapt_model_from_file(parent_module, model_variant):
|
||||
adapt_file = os.path.join(os.path.dirname(__file__), '_pruned', model_variant + '.txt')
|
||||
with open(adapt_file, 'r') as f:
|
||||
return adapt_model_from_string(parent_module, f.read().strip())
|
||||
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Reference in new issue