Merge branch 'alexander-soare-nested_transformer'

pull/738/head
Ross Wightman 4 years ago
commit c8ec1ffcb9

@ -23,6 +23,9 @@ I'm fortunate to be able to dedicate significant time and money of my own suppor
## What's New ## What's New
### July 5, 2021
* Add 'Aggregating Nested Transformer' (NesT) w/ weights converted from official [Flax impl](https://github.com/google-research/nested-transformer). Contributed by [Alexander Soare](https://github.com/alexander-soare).
### June 23, 2021 ### June 23, 2021
* Reproduce gMLP model training, `gmlp_s16_224` trained to 79.6 top-1, matching [paper](https://arxiv.org/abs/2105.08050). Hparams for this and other recent MLP training [here](https://gist.github.com/rwightman/d6c264a9001f9167e06c209f630b2cc6) * Reproduce gMLP model training, `gmlp_s16_224` trained to 79.6 top-1, matching [paper](https://arxiv.org/abs/2105.08050). Hparams for this and other recent MLP training [here](https://gist.github.com/rwightman/d6c264a9001f9167e06c209f630b2cc6)

@ -0,0 +1,109 @@
"""
Convert weights from https://github.com/google-research/nested-transformer
NOTE: You'll need https://github.com/google/CommonLoopUtils, not included in requirements.txt
"""
import sys
import numpy as np
import torch
from clu import checkpoint
arch_depths = {
'nest_base': [2, 2, 20],
'nest_small': [2, 2, 20],
'nest_tiny': [2, 2, 8],
}
def convert_nest(checkpoint_path, arch):
"""
Expects path to checkpoint which is a dir containing 4 files like in each of these folders
- https://console.cloud.google.com/storage/browser/gresearch/nest-checkpoints
`arch` is needed to
Returns a state dict that can be used with `torch.nn.Module.load_state_dict`
Hint: Follow timm.models.nest.Nest.__init__ and
https://github.com/google-research/nested-transformer/blob/main/models/nest_net.py
"""
assert arch in ['nest_base', 'nest_small', 'nest_tiny'], "Your `arch` is not supported"
flax_dict = checkpoint.load_state_dict(checkpoint_path)['optimizer']['target']
state_dict = {}
# Patch embedding
state_dict['patch_embed.proj.weight'] = torch.tensor(
flax_dict['PatchEmbedding_0']['Conv_0']['kernel']).permute(3, 2, 0, 1)
state_dict['patch_embed.proj.bias'] = torch.tensor(flax_dict['PatchEmbedding_0']['Conv_0']['bias'])
# Positional embeddings
posemb_keys = [k for k in flax_dict.keys() if k.startswith('PositionEmbedding')]
for i, k in enumerate(posemb_keys):
state_dict[f'levels.{i}.pos_embed'] = torch.tensor(flax_dict[k]['pos_embedding'])
# Transformer encoders
depths = arch_depths[arch]
for level in range(len(depths)):
for layer in range(depths[level]):
global_layer_ix = sum(depths[:level]) + layer
# Norms
for i in range(2):
state_dict[f'levels.{level}.transformer_encoder.{layer}.norm{i+1}.weight'] = torch.tensor(
flax_dict[f'EncoderNDBlock_{global_layer_ix}'][f'LayerNorm_{i}']['scale'])
state_dict[f'levels.{level}.transformer_encoder.{layer}.norm{i+1}.bias'] = torch.tensor(
flax_dict[f'EncoderNDBlock_{global_layer_ix}'][f'LayerNorm_{i}']['bias'])
# Attention qkv
w_q = flax_dict[f'EncoderNDBlock_{global_layer_ix}']['MultiHeadAttention_0']['DenseGeneral_0']['kernel']
w_kv = flax_dict[f'EncoderNDBlock_{global_layer_ix}']['MultiHeadAttention_0']['DenseGeneral_1']['kernel']
# Pay attention to dims here (maybe get pen and paper)
w_kv = np.concatenate(np.split(w_kv, 2, -1), 1)
w_qkv = np.concatenate([w_q, w_kv], 1)
state_dict[f'levels.{level}.transformer_encoder.{layer}.attn.qkv.weight'] = torch.tensor(w_qkv).flatten(1).permute(1,0)
b_q = flax_dict[f'EncoderNDBlock_{global_layer_ix}']['MultiHeadAttention_0']['DenseGeneral_0']['bias']
b_kv = flax_dict[f'EncoderNDBlock_{global_layer_ix}']['MultiHeadAttention_0']['DenseGeneral_1']['bias']
# Pay attention to dims here (maybe get pen and paper)
b_kv = np.concatenate(np.split(b_kv, 2, -1), 0)
b_qkv = np.concatenate([b_q, b_kv], 0)
state_dict[f'levels.{level}.transformer_encoder.{layer}.attn.qkv.bias'] = torch.tensor(b_qkv).reshape(-1)
# Attention proj
w_proj = flax_dict[f'EncoderNDBlock_{global_layer_ix}']['MultiHeadAttention_0']['proj_kernel']
w_proj = torch.tensor(w_proj).permute(2, 1, 0).flatten(1)
state_dict[f'levels.{level}.transformer_encoder.{layer}.attn.proj.weight'] = w_proj
state_dict[f'levels.{level}.transformer_encoder.{layer}.attn.proj.bias'] = torch.tensor(
flax_dict[f'EncoderNDBlock_{global_layer_ix}']['MultiHeadAttention_0']['bias'])
# MLP
for i in range(2):
state_dict[f'levels.{level}.transformer_encoder.{layer}.mlp.fc{i+1}.weight'] = torch.tensor(
flax_dict[f'EncoderNDBlock_{global_layer_ix}']['MlpBlock_0'][f'Dense_{i}']['kernel']).permute(1, 0)
state_dict[f'levels.{level}.transformer_encoder.{layer}.mlp.fc{i+1}.bias'] = torch.tensor(
flax_dict[f'EncoderNDBlock_{global_layer_ix}']['MlpBlock_0'][f'Dense_{i}']['bias'])
# Block aggregations (ConvPool)
for level in range(1, len(depths)):
# Convs
state_dict[f'levels.{level}.pool.conv.weight'] = torch.tensor(
flax_dict[f'ConvPool_{level-1}']['Conv_0']['kernel']).permute(3, 2, 0, 1)
state_dict[f'levels.{level}.pool.conv.bias'] = torch.tensor(
flax_dict[f'ConvPool_{level-1}']['Conv_0']['bias'])
# Norms
state_dict[f'levels.{level}.pool.norm.weight'] = torch.tensor(
flax_dict[f'ConvPool_{level-1}']['LayerNorm_0']['scale'])
state_dict[f'levels.{level}.pool.norm.bias'] = torch.tensor(
flax_dict[f'ConvPool_{level-1}']['LayerNorm_0']['bias'])
# Final norm
state_dict[f'norm.weight'] = torch.tensor(flax_dict['LayerNorm_0']['scale'])
state_dict[f'norm.bias'] = torch.tensor(flax_dict['LayerNorm_0']['bias'])
# Classifier
state_dict['head.weight'] = torch.tensor(flax_dict['Dense_0']['kernel']).permute(1, 0)
state_dict['head.bias'] = torch.tensor(flax_dict['Dense_0']['bias'])
return state_dict
if __name__ == '__main__':
variant = sys.argv[1] # base, small, or tiny
state_dict = convert_nest(f'./nest-{variant[0]}_imagenet', f'nest_{variant}')
torch.save(state_dict, f'./jx_nest_{variant}.pth')

@ -17,7 +17,7 @@ if hasattr(torch._C, '_jit_set_profiling_executor'):
# transformer models don't support many of the spatial / feature based model functionalities # transformer models don't support many of the spatial / feature based model functionalities
NON_STD_FILTERS = [ NON_STD_FILTERS = [
'vit_*', 'tnt_*', 'pit_*', 'swin_*', 'coat_*', 'cait_*', '*mixer_*', 'gmlp_*', 'resmlp_*', 'twins_*', 'vit_*', 'tnt_*', 'pit_*', 'swin_*', 'coat_*', 'cait_*', '*mixer_*', 'gmlp_*', 'resmlp_*', 'twins_*',
'convit_*', 'levit*', 'visformer*', 'deit*'] 'convit_*', 'levit*', 'visformer*', 'deit*', 'jx_nest_*', 'nest_*']
NUM_NON_STD = len(NON_STD_FILTERS) NUM_NON_STD = len(NON_STD_FILTERS)
# exclude models that cause specific test failures # exclude models that cause specific test failures

@ -20,6 +20,7 @@ from .levit import *
from .mlp_mixer import * from .mlp_mixer import *
from .mobilenetv3 import * from .mobilenetv3 import *
from .nasnet import * from .nasnet import *
from .nest import *
from .nfnet import * from .nfnet import *
from .pit import * from .pit import *
from .pnasnet import * from .pnasnet import *

@ -15,9 +15,10 @@ class GroupNorm(nn.GroupNorm):
class LayerNorm2d(nn.LayerNorm): class LayerNorm2d(nn.LayerNorm):
""" Layernorm for channels of '2d' spatial BCHW tensors """ """ LayerNorm for channels of '2D' spatial BCHW tensors """
def __init__(self, num_channels): def __init__(self, num_channels):
super().__init__([num_channels, 1, 1]) super().__init__(num_channels)
def forward(self, x: torch.Tensor) -> torch.Tensor: def forward(self, x: torch.Tensor) -> torch.Tensor:
return F.layer_norm(x, self.normalized_shape, self.weight, self.bias, self.eps) return F.layer_norm(
x.permute(0, 2, 3, 1), self.normalized_shape, self.weight, self.bias, self.eps).permute(0, 3, 1, 2)

@ -0,0 +1,463 @@
""" Nested Transformer (NesT) in PyTorch
A PyTorch implement of Aggregating Nested Transformers as described in:
'Aggregating Nested Transformers'
- https://arxiv.org/abs/2105.12723
The official Jax code is released and available at https://github.com/google-research/nested-transformer. The weights
have been converted with convert/convert_nest_flax.py
Acknowledgments:
* The paper authors for sharing their research, code, and model weights
* Ross Wightman's existing code off which I based this
Copyright 2021 Alexander Soare
"""
import collections.abc
import logging
import math
from functools import partial
import torch
import torch.nn.functional as F
from torch import nn
from timm.data import IMAGENET_DEFAULT_MEAN, IMAGENET_DEFAULT_STD
from .helpers import build_model_with_cfg, named_apply
from .layers import PatchEmbed, Mlp, DropPath, create_classifier, trunc_normal_
from .layers import create_conv2d, create_pool2d, to_ntuple
from .registry import register_model
_logger = logging.getLogger(__name__)
def _cfg(url='', **kwargs):
return {
'url': url,
'num_classes': 1000, 'input_size': (3, 224, 224), 'pool_size': [14, 14],
'crop_pct': .875, 'interpolation': 'bicubic', 'fixed_input_size': True,
'mean': IMAGENET_DEFAULT_MEAN, 'std': IMAGENET_DEFAULT_STD,
'first_conv': 'patch_embed.proj', 'classifier': 'head',
**kwargs
}
default_cfgs = {
# (weights from official Google JAX impl)
'nest_base': _cfg(),
'nest_small': _cfg(),
'nest_tiny': _cfg(),
'jx_nest_base': _cfg(
url='https://github.com/rwightman/pytorch-image-models/releases/download/v0.1-vt3p-weights/jx_nest_base-8bc41011.pth'),
'jx_nest_small': _cfg(
url='https://github.com/rwightman/pytorch-image-models/releases/download/v0.1-vt3p-weights/jx_nest_small-422eaded.pth'),
'jx_nest_tiny': _cfg(
url='https://github.com/rwightman/pytorch-image-models/releases/download/v0.1-vt3p-weights/jx_nest_tiny-e3428fb9.pth'),
}
class Attention(nn.Module):
"""
This is much like `.vision_transformer.Attention` but uses *localised* self attention by accepting an input with
an extra "image block" dim
"""
def __init__(self, dim, num_heads=8, qkv_bias=False, attn_drop=0., proj_drop=0.):
super().__init__()
self.num_heads = num_heads
head_dim = dim // num_heads
self.scale = head_dim ** -0.5
self.qkv = nn.Linear(dim, 3*dim, bias=qkv_bias)
self.attn_drop = nn.Dropout(attn_drop)
self.proj = nn.Linear(dim, dim)
self.proj_drop = nn.Dropout(proj_drop)
def forward(self, x):
"""
x is shape: B (batch_size), T (image blocks), N (seq length per image block), C (embed dim)
"""
B, T, N, C = x.shape
# result of next line is (qkv, B, num (H)eads, T, N, (C')hannels per head)
qkv = self.qkv(x).reshape(B, T, N, 3, self.num_heads, C // self.num_heads).permute(3, 0, 4, 1, 2, 5)
q, k, v = qkv[0], qkv[1], qkv[2] # make torchscript happy (cannot use tensor as tuple)
attn = (q @ k.transpose(-2, -1)) * self.scale # (B, H, T, N, N)
attn = attn.softmax(dim=-1)
attn = self.attn_drop(attn)
# (B, H, T, N, C'), permute -> (B, T, N, C', H)
x = (attn @ v).permute(0, 2, 3, 4, 1).reshape(B, T, N, C)
x = self.proj(x)
x = self.proj_drop(x)
return x # (B, T, N, C)
class TransformerLayer(nn.Module):
"""
This is much like `.vision_transformer.Block` but:
- Called TransformerLayer here to allow for "block" as defined in the paper ("non-overlapping image blocks")
- Uses modified Attention layer that handles the "block" dimension
"""
def __init__(self, dim, num_heads, mlp_ratio=4., qkv_bias=False, drop=0., attn_drop=0., drop_path=0.,
act_layer=nn.GELU, norm_layer=nn.LayerNorm):
super().__init__()
self.norm1 = norm_layer(dim)
self.attn = Attention(dim, num_heads=num_heads, qkv_bias=qkv_bias, attn_drop=attn_drop, proj_drop=drop)
self.drop_path = DropPath(drop_path) if drop_path > 0. else nn.Identity()
self.norm2 = norm_layer(dim)
mlp_hidden_dim = int(dim * mlp_ratio)
self.mlp = Mlp(in_features=dim, hidden_features=mlp_hidden_dim, act_layer=act_layer, drop=drop)
def forward(self, x):
y = self.norm1(x)
x = x + self.drop_path(self.attn(y))
x = x + self.drop_path(self.mlp(self.norm2(x)))
return x
class ConvPool(nn.Module):
def __init__(self, in_channels, out_channels, norm_layer, pad_type=''):
super().__init__()
self.conv = create_conv2d(in_channels, out_channels, kernel_size=3, padding=pad_type, bias=True)
self.norm = norm_layer(out_channels)
self.pool = create_pool2d('max', kernel_size=3, stride=2, padding=pad_type)
def forward(self, x):
"""
x is expected to have shape (B, C, H, W)
"""
assert x.shape[-2] % 2 == 0, 'BlockAggregation requires even input spatial dims'
assert x.shape[-1] % 2 == 0, 'BlockAggregation requires even input spatial dims'
x = self.conv(x)
# Layer norm done over channel dim only
x = self.norm(x.permute(0, 2, 3, 1)).permute(0, 3, 1, 2)
x = self.pool(x)
return x # (B, C, H//2, W//2)
def blockify(x, block_size: int):
"""image to blocks
Args:
x (Tensor): with shape (B, H, W, C)
block_size (int): edge length of a single square block in units of H, W
"""
B, H, W, C = x.shape
assert H % block_size == 0, '`block_size` must divide input height evenly'
assert W % block_size == 0, '`block_size` must divide input width evenly'
grid_height = H // block_size
grid_width = W // block_size
x = x.reshape(B, grid_height, block_size, grid_width, block_size, C)
x = x.transpose(2, 3).reshape(B, grid_height * grid_width, -1, C)
return x # (B, T, N, C)
def deblockify(x, block_size: int):
"""blocks to image
Args:
x (Tensor): with shape (B, T, N, C) where T is number of blocks and N is sequence size per block
block_size (int): edge length of a single square block in units of desired H, W
"""
B, T, _, C = x.shape
grid_size = int(math.sqrt(T))
height = width = grid_size * block_size
x = x.reshape(B, grid_size, grid_size, block_size, block_size, C)
x = x.transpose(2, 3).reshape(B, height, width, C)
return x # (B, H, W, C)
class NestLevel(nn.Module):
""" Single hierarchical level of a Nested Transformer
"""
def __init__(
self, num_blocks, block_size, seq_length, num_heads, depth, embed_dim, prev_embed_dim=None,
mlp_ratio=4., qkv_bias=True, drop_rate=0., attn_drop_rate=0., drop_path_rates=[],
norm_layer=None, act_layer=None, pad_type=''):
super().__init__()
self.block_size = block_size
self.pos_embed = nn.Parameter(torch.zeros(1, num_blocks, seq_length, embed_dim))
if prev_embed_dim is not None:
self.pool = ConvPool(prev_embed_dim, embed_dim, norm_layer=norm_layer, pad_type=pad_type)
else:
self.pool = nn.Identity()
# Transformer encoder
if len(drop_path_rates):
assert len(drop_path_rates) == depth, 'Must provide as many drop path rates as there are transformer layers'
self.transformer_encoder = nn.Sequential(*[
TransformerLayer(
dim=embed_dim, num_heads=num_heads, mlp_ratio=mlp_ratio, qkv_bias=qkv_bias,
drop=drop_rate, attn_drop=attn_drop_rate, drop_path=drop_path_rates[i],
norm_layer=norm_layer, act_layer=act_layer)
for i in range(depth)])
def forward(self, x):
"""
expects x as (B, C, H, W)
"""
x = self.pool(x)
x = x.permute(0, 2, 3, 1) # (B, H', W', C), switch to channels last for transformer
x = blockify(x, self.block_size) # (B, T, N, C')
x = x + self.pos_embed
x = self.transformer_encoder(x) # (B, T, N, C')
x = deblockify(x, self.block_size) # (B, H', W', C')
# Channel-first for block aggregation, and generally to replicate convnet feature map at each stage
return x.permute(0, 3, 1, 2) # (B, C, H', W')
class Nest(nn.Module):
""" Nested Transformer (NesT)
A PyTorch impl of : `Aggregating Nested Transformers`
- https://arxiv.org/abs/2105.12723
"""
def __init__(self, img_size=224, in_chans=3, patch_size=4, num_levels=3, embed_dims=(128, 256, 512),
num_heads=(4, 8, 16), depths=(2, 2, 20), num_classes=1000, mlp_ratio=4., qkv_bias=True,
drop_rate=0., attn_drop_rate=0., drop_path_rate=0.5, norm_layer=None, act_layer=None,
pad_type='', weight_init='', global_pool='avg'):
"""
Args:
img_size (int, tuple): input image size
in_chans (int): number of input channels
patch_size (int): patch size
num_levels (int): number of block hierarchies (T_d in the paper)
embed_dims (int, tuple): embedding dimensions of each level
num_heads (int, tuple): number of attention heads for each level
depths (int, tuple): number of transformer layers for each level
num_classes (int): number of classes for classification head
mlp_ratio (int): ratio of mlp hidden dim to embedding dim for MLP of transformer layers
qkv_bias (bool): enable bias for qkv if True
drop_rate (float): dropout rate for MLP of transformer layers, MSA final projection layer, and classifier
attn_drop_rate (float): attention dropout rate
drop_path_rate (float): stochastic depth rate
norm_layer: (nn.Module): normalization layer for transformer layers
act_layer: (nn.Module): activation layer in MLP of transformer layers
pad_type: str: Type of padding to use '' for PyTorch symmetric, 'same' for TF SAME
weight_init: (str): weight init scheme
global_pool: (str): type of pooling operation to apply to final feature map
Notes:
- Default values follow NesT-B from the original Jax code.
- `embed_dims`, `num_heads`, `depths` should be ints or tuples with length `num_levels`.
- For those following the paper, Table A1 may have errors!
- https://github.com/google-research/nested-transformer/issues/2
"""
super().__init__()
for param_name in ['embed_dims', 'num_heads', 'depths']:
param_value = locals()[param_name]
if isinstance(param_value, collections.abc.Sequence):
assert len(param_value) == num_levels, f'Require `len({param_name}) == num_levels`'
embed_dims = to_ntuple(num_levels)(embed_dims)
num_heads = to_ntuple(num_levels)(num_heads)
depths = to_ntuple(num_levels)(depths)
self.num_classes = num_classes
self.num_features = embed_dims[-1]
self.feature_info = []
norm_layer = norm_layer or partial(nn.LayerNorm, eps=1e-6)
act_layer = act_layer or nn.GELU
self.drop_rate = drop_rate
self.num_levels = num_levels
if isinstance(img_size, collections.abc.Sequence):
assert img_size[0] == img_size[1], 'Model only handles square inputs'
img_size = img_size[0]
assert img_size % patch_size == 0, '`patch_size` must divide `img_size` evenly'
self.patch_size = patch_size
# Number of blocks at each level
self.num_blocks = (4 ** torch.arange(num_levels)).flip(0).tolist()
assert (img_size // patch_size) % math.sqrt(self.num_blocks[0]) == 0, \
'First level blocks don\'t fit evenly. Check `img_size`, `patch_size`, and `num_levels`'
# Block edge size in units of patches
# Hint: (img_size // patch_size) gives number of patches along edge of image. sqrt(self.num_blocks[0]) is the
# number of blocks along edge of image
self.block_size = int((img_size // patch_size) // math.sqrt(self.num_blocks[0]))
# Patch embedding
self.patch_embed = PatchEmbed(
img_size=img_size, patch_size=patch_size, in_chans=in_chans, embed_dim=embed_dims[0], flatten=False)
self.num_patches = self.patch_embed.num_patches
self.seq_length = self.num_patches // self.num_blocks[0]
# Build up each hierarchical level
levels = []
dp_rates = [x.tolist() for x in torch.linspace(0, drop_path_rate, sum(depths)).split(depths)]
prev_dim = None
curr_stride = 4
for i in range(len(self.num_blocks)):
dim = embed_dims[i]
levels.append(NestLevel(
self.num_blocks[i], self.block_size, self.seq_length, num_heads[i], depths[i], dim, prev_dim,
mlp_ratio, qkv_bias, drop_rate, attn_drop_rate, dp_rates[i], norm_layer, act_layer, pad_type=pad_type))
self.feature_info += [dict(num_chs=dim, reduction=curr_stride, module=f'levels.{i}')]
prev_dim = dim
curr_stride *= 2
self.levels = nn.Sequential(*levels)
# Final normalization layer
self.norm = norm_layer(embed_dims[-1])
# Classifier
self.global_pool, self.head = create_classifier(self.num_features, self.num_classes, pool_type=global_pool)
self.init_weights(weight_init)
def init_weights(self, mode=''):
assert mode in ('nlhb', '')
head_bias = -math.log(self.num_classes) if 'nlhb' in mode else 0.
for level in self.levels:
trunc_normal_(level.pos_embed, std=.02, a=-2, b=2)
named_apply(partial(_init_nest_weights, head_bias=head_bias), self)
@torch.jit.ignore
def no_weight_decay(self):
return {f'level.{i}.pos_embed' for i in range(len(self.levels))}
def get_classifier(self):
return self.head
def reset_classifier(self, num_classes, global_pool='avg'):
self.num_classes = num_classes
self.global_pool, self.head = create_classifier(
self.num_features, self.num_classes, pool_type=global_pool)
def forward_features(self, x):
""" x shape (B, C, H, W)
"""
B, _, H, W = x.shape
x = self.patch_embed(x)
x = self.levels(x)
# Layer norm done over channel dim only (to NHWC and back)
x = self.norm(x.permute(0, 2, 3, 1)).permute(0, 3, 1, 2)
return x
def forward(self, x):
""" x shape (B, C, H, W)
"""
x = self.forward_features(x)
x = self.global_pool(x)
if self.drop_rate > 0.:
x = F.dropout(x, p=self.drop_rate, training=self.training)
return self.head(x)
def _init_nest_weights(module: nn.Module, name: str = '', head_bias: float = 0.):
""" NesT weight initialization
Can replicate Jax implementation. Otherwise follows vision_transformer.py
"""
if isinstance(module, nn.Linear):
if name.startswith('head'):
trunc_normal_(module.weight, std=.02, a=-2, b=2)
nn.init.constant_(module.bias, head_bias)
else:
trunc_normal_(module.weight, std=.02, a=-2, b=2)
if module.bias is not None:
nn.init.zeros_(module.bias)
elif isinstance(module, nn.Conv2d):
trunc_normal_(module.weight, std=.02, a=-2, b=2)
if module.bias is not None:
nn.init.zeros_(module.bias)
elif isinstance(module, (nn.LayerNorm, nn.GroupNorm, nn.BatchNorm2d)):
nn.init.zeros_(module.bias)
nn.init.ones_(module.weight)
def resize_pos_embed(posemb, posemb_new):
"""
Rescale the grid of position embeddings when loading from state_dict
Expected shape of position embeddings is (1, T, N, C), and considers only square images
"""
_logger.info('Resized position embedding: %s to %s', posemb.shape, posemb_new.shape)
seq_length_old = posemb.shape[2]
num_blocks_new, seq_length_new = posemb_new.shape[1:3]
size_new = int(math.sqrt(num_blocks_new*seq_length_new))
# First change to (1, C, H, W)
posemb = deblockify(posemb, int(math.sqrt(seq_length_old))).permute(0, 3, 1, 2)
posemb = F.interpolate(posemb, size=[size_new, size_new], mode='bilinear')
# Now change to new (1, T, N, C)
posemb = blockify(posemb.permute(0, 2, 3, 1), int(math.sqrt(seq_length_new)))
return posemb
def checkpoint_filter_fn(state_dict, model):
""" resize positional embeddings of pretrained weights """
pos_embed_keys = [k for k in state_dict.keys() if k.startswith('pos_embed_')]
for k in pos_embed_keys:
if state_dict[k].shape != getattr(model, k).shape:
state_dict[k] = resize_pos_embed(state_dict[k], getattr(model, k))
return state_dict
def _create_nest(variant, pretrained=False, default_cfg=None, **kwargs):
default_cfg = default_cfg or default_cfgs[variant]
model = build_model_with_cfg(
Nest, variant, pretrained,
default_cfg=default_cfg,
feature_cfg=dict(out_indices=(0, 1, 2), flatten_sequential=True),
pretrained_filter_fn=checkpoint_filter_fn,
**kwargs)
return model
@register_model
def nest_base(pretrained=False, **kwargs):
""" Nest-B @ 224x224
"""
model_kwargs = dict(
embed_dims=(128, 256, 512), num_heads=(4, 8, 16), depths=(2, 2, 20), **kwargs)
model = _create_nest('nest_base', pretrained=pretrained, **model_kwargs)
return model
@register_model
def nest_small(pretrained=False, **kwargs):
""" Nest-S @ 224x224
"""
model_kwargs = dict(embed_dims=(96, 192, 384), num_heads=(3, 6, 12), depths=(2, 2, 20), **kwargs)
model = _create_nest('nest_small', pretrained=pretrained, **model_kwargs)
return model
@register_model
def nest_tiny(pretrained=False, **kwargs):
""" Nest-T @ 224x224
"""
model_kwargs = dict(embed_dims=(96, 192, 384), num_heads=(3, 6, 12), depths=(2, 2, 8), **kwargs)
model = _create_nest('nest_tiny', pretrained=pretrained, **model_kwargs)
return model
@register_model
def jx_nest_base(pretrained=False, **kwargs):
""" Nest-B @ 224x224, Pretrained weights converted from official Jax impl.
"""
kwargs['pad_type'] = 'same'
model_kwargs = dict(embed_dims=(128, 256, 512), num_heads=(4, 8, 16), depths=(2, 2, 20), **kwargs)
model = _create_nest('jx_nest_base', pretrained=pretrained, **model_kwargs)
return model
@register_model
def jx_nest_small(pretrained=False, **kwargs):
""" Nest-S @ 224x224, Pretrained weights converted from official Jax impl.
"""
kwargs['pad_type'] = 'same'
model_kwargs = dict(embed_dims=(96, 192, 384), num_heads=(3, 6, 12), depths=(2, 2, 20), **kwargs)
model = _create_nest('jx_nest_small', pretrained=pretrained, **model_kwargs)
return model
@register_model
def jx_nest_tiny(pretrained=False, **kwargs):
""" Nest-T @ 224x224, Pretrained weights converted from official Jax impl.
"""
kwargs['pad_type'] = 'same'
model_kwargs = dict(embed_dims=(96, 192, 384), num_heads=(3, 6, 12), depths=(2, 2, 8), **kwargs)
model = _create_nest('jx_nest_tiny', pretrained=pretrained, **model_kwargs)
return model
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