Merge pull request #1249 from okojoalg/sequencer

Add Sequencer
pull/1256/head
Ross Wightman 3 years ago committed by GitHub
commit d07d015173
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GPG Key ID: 4AEE18F83AFDEB23

@ -25,7 +25,7 @@ if hasattr(torch._C, '_jit_set_profiling_executor'):
NON_STD_FILTERS = [
'vit_*', 'tnt_*', 'pit_*', 'swin_*', 'coat_*', 'cait_*', '*mixer_*', 'gmlp_*', 'resmlp_*', 'twins_*',
'convit_*', 'levit*', 'visformer*', 'deit*', 'jx_nest_*', 'nest_*', 'xcit_*', 'crossvit_*', 'beit_*',
'poolformer_*', 'volo_*']
'poolformer_*', 'volo_*', 'sequencer2d_*']
NUM_NON_STD = len(NON_STD_FILTERS)
# exclude models that cause specific test failures
@ -202,13 +202,15 @@ def test_model_default_cfgs_non_std(model_name, batch_size):
pytest.skip("Fixed input size model > limit.")
input_tensor = torch.randn((batch_size, *input_size))
feat_dim = getattr(model, 'feature_dim', None)
outputs = model.forward_features(input_tensor)
if isinstance(outputs, (tuple, list)):
# cannot currently verify multi-tensor output.
pass
else:
feat_dim = -1 if outputs.ndim == 3 else 1
if feat_dim is None:
feat_dim = -1 if outputs.ndim == 3 else 1
assert outputs.shape[feat_dim] == model.num_features
# test forward after deleting the classifier, output should be poooled, size(-1) == model.num_features
@ -216,14 +218,16 @@ def test_model_default_cfgs_non_std(model_name, batch_size):
outputs = model.forward(input_tensor)
if isinstance(outputs, (tuple, list)):
outputs = outputs[0]
feat_dim = -1 if outputs.ndim == 3 else 1
if feat_dim is None:
feat_dim = -1 if outputs.ndim == 3 else 1
assert outputs.shape[feat_dim] == model.num_features, 'pooled num_features != config'
model = create_model(model_name, pretrained=False, num_classes=0).eval()
outputs = model.forward(input_tensor)
if isinstance(outputs, (tuple, list)):
outputs = outputs[0]
feat_dim = -1 if outputs.ndim == 3 else 1
if feat_dim is None:
feat_dim = -1 if outputs.ndim == 3 else 1
assert outputs.shape[feat_dim] == model.num_features
# check classifier name matches default_cfg

@ -39,6 +39,7 @@ from .resnetv2 import *
from .rexnet import *
from .selecsls import *
from .senet import *
from .sequencer import *
from .sknet import *
from .swin_transformer import *
from .swin_transformer_v2_cr import *

@ -0,0 +1,417 @@
""" Sequencer
Paper: `Sequencer: Deep LSTM for Image Classification` - https://arxiv.org/pdf/2205.01972.pdf
"""
# Copyright (c) 2022. Yuki Tatsunami
# Licensed under the Apache License, Version 2.0 (the "License");
import math
from functools import partial
from typing import Tuple
import torch
import torch.nn as nn
from timm.data import IMAGENET_DEFAULT_MEAN, IMAGENET_DEFAULT_STD, DEFAULT_CROP_PCT
from .helpers import build_model_with_cfg, named_apply
from .layers import lecun_normal_, DropPath, Mlp, PatchEmbed as TimmPatchEmbed
from .registry import register_model
def _cfg(url='', **kwargs):
return {
'url': url,
'num_classes': 1000, 'input_size': (3, 224, 224), 'pool_size': None,
'crop_pct': DEFAULT_CROP_PCT, 'interpolation': 'bicubic', 'fixed_input_size': True,
'mean': IMAGENET_DEFAULT_MEAN, 'std': IMAGENET_DEFAULT_STD,
'first_conv': 'stem.proj', 'classifier': 'head',
**kwargs
}
default_cfgs = dict(
sequencer2d_s=_cfg(url="https://github.com/okojoalg/sequencer/releases/download/weights/sequencer2d_s.pth"),
sequencer2d_m=_cfg(url="https://github.com/okojoalg/sequencer/releases/download/weights/sequencer2d_m.pth"),
sequencer2d_l=_cfg(url="https://github.com/okojoalg/sequencer/releases/download/weights/sequencer2d_l.pth"),
)
def _init_weights(module: nn.Module, name: str, head_bias: float = 0., flax=False):
if isinstance(module, nn.Linear):
if name.startswith('head'):
nn.init.zeros_(module.weight)
nn.init.constant_(module.bias, head_bias)
else:
if flax:
# Flax defaults
lecun_normal_(module.weight)
if module.bias is not None:
nn.init.zeros_(module.bias)
else:
nn.init.xavier_uniform_(module.weight)
if module.bias is not None:
if 'mlp' in name:
nn.init.normal_(module.bias, std=1e-6)
else:
nn.init.zeros_(module.bias)
elif isinstance(module, nn.Conv2d):
lecun_normal_(module.weight)
if module.bias is not None:
nn.init.zeros_(module.bias)
elif isinstance(module, (nn.LayerNorm, nn.BatchNorm2d, nn.GroupNorm)):
nn.init.ones_(module.weight)
nn.init.zeros_(module.bias)
elif isinstance(module, (nn.RNN, nn.GRU, nn.LSTM)):
stdv = 1.0 / math.sqrt(module.hidden_size)
for weight in module.parameters():
nn.init.uniform_(weight, -stdv, stdv)
elif hasattr(module, 'init_weights'):
module.init_weights()
def get_stage(
index, layers, patch_sizes, embed_dims, hidden_sizes, mlp_ratios, block_layer, rnn_layer, mlp_layer,
norm_layer, act_layer, num_layers, bidirectional, union,
with_fc, drop=0., drop_path_rate=0., **kwargs):
assert len(layers) == len(patch_sizes) == len(embed_dims) == len(hidden_sizes) == len(mlp_ratios)
blocks = []
for block_idx in range(layers[index]):
drop_path = drop_path_rate * (block_idx + sum(layers[:index])) / (sum(layers) - 1)
blocks.append(block_layer(
embed_dims[index], hidden_sizes[index], mlp_ratio=mlp_ratios[index],
rnn_layer=rnn_layer, mlp_layer=mlp_layer, norm_layer=norm_layer, act_layer=act_layer,
num_layers=num_layers, bidirectional=bidirectional, union=union, with_fc=with_fc,
drop=drop, drop_path=drop_path))
if index < len(embed_dims) - 1:
blocks.append(Downsample2D(embed_dims[index], embed_dims[index + 1], patch_sizes[index + 1]))
blocks = nn.Sequential(*blocks)
return blocks
class RNNIdentity(nn.Module):
def __init__(self, *args, **kwargs):
super(RNNIdentity, self).__init__()
def forward(self, x: torch.Tensor) -> Tuple[torch.Tensor, None]:
return x, None
class RNN2DBase(nn.Module):
def __init__(
self, input_size: int, hidden_size: int,
num_layers: int = 1, bias: bool = True, bidirectional: bool = True,
union="cat", with_fc=True):
super().__init__()
self.input_size = input_size
self.hidden_size = hidden_size
self.output_size = 2 * hidden_size if bidirectional else hidden_size
self.union = union
self.with_vertical = True
self.with_horizontal = True
self.with_fc = with_fc
self.fc = None
if with_fc:
if union == "cat":
self.fc = nn.Linear(2 * self.output_size, input_size)
elif union == "add":
self.fc = nn.Linear(self.output_size, input_size)
elif union == "vertical":
self.fc = nn.Linear(self.output_size, input_size)
self.with_horizontal = False
elif union == "horizontal":
self.fc = nn.Linear(self.output_size, input_size)
self.with_vertical = False
else:
raise ValueError("Unrecognized union: " + union)
elif union == "cat":
pass
if 2 * self.output_size != input_size:
raise ValueError(f"The output channel {2 * self.output_size} is different from the input channel {input_size}.")
elif union == "add":
pass
if self.output_size != input_size:
raise ValueError(f"The output channel {self.output_size} is different from the input channel {input_size}.")
elif union == "vertical":
if self.output_size != input_size:
raise ValueError(f"The output channel {self.output_size} is different from the input channel {input_size}.")
self.with_horizontal = False
elif union == "horizontal":
if self.output_size != input_size:
raise ValueError(f"The output channel {self.output_size} is different from the input channel {input_size}.")
self.with_vertical = False
else:
raise ValueError("Unrecognized union: " + union)
self.rnn_v = RNNIdentity()
self.rnn_h = RNNIdentity()
def forward(self, x):
B, H, W, C = x.shape
if self.with_vertical:
v = x.permute(0, 2, 1, 3)
v = v.reshape(-1, H, C)
v, _ = self.rnn_v(v)
v = v.reshape(B, W, H, -1)
v = v.permute(0, 2, 1, 3)
else:
v = None
if self.with_horizontal:
h = x.reshape(-1, W, C)
h, _ = self.rnn_h(h)
h = h.reshape(B, H, W, -1)
else:
h = None
if v is not None and h is not None:
if self.union == "cat":
x = torch.cat([v, h], dim=-1)
else:
x = v + h
elif v is not None:
x = v
elif h is not None:
x = h
if self.fc is not None:
x = self.fc(x)
return x
class LSTM2D(RNN2DBase):
def __init__(
self, input_size: int, hidden_size: int,
num_layers: int = 1, bias: bool = True, bidirectional: bool = True,
union="cat", with_fc=True):
super().__init__(input_size, hidden_size, num_layers, bias, bidirectional, union, with_fc)
if self.with_vertical:
self.rnn_v = nn.LSTM(input_size, hidden_size, num_layers, batch_first=True, bias=bias, bidirectional=bidirectional)
if self.with_horizontal:
self.rnn_h = nn.LSTM(input_size, hidden_size, num_layers, batch_first=True, bias=bias, bidirectional=bidirectional)
class Sequencer2DBlock(nn.Module):
def __init__(
self, dim, hidden_size, mlp_ratio=3.0, rnn_layer=LSTM2D, mlp_layer=Mlp,
norm_layer=partial(nn.LayerNorm, eps=1e-6), act_layer=nn.GELU,
num_layers=1, bidirectional=True, union="cat", with_fc=True, drop=0., drop_path=0.):
super().__init__()
channels_dim = int(mlp_ratio * dim)
self.norm1 = norm_layer(dim)
self.rnn_tokens = rnn_layer(dim, hidden_size, num_layers=num_layers, bidirectional=bidirectional,
union=union, with_fc=with_fc)
self.drop_path = DropPath(drop_path) if drop_path > 0. else nn.Identity()
self.norm2 = norm_layer(dim)
self.mlp_channels = mlp_layer(dim, channels_dim, act_layer=act_layer, drop=drop)
def forward(self, x):
x = x + self.drop_path(self.rnn_tokens(self.norm1(x)))
x = x + self.drop_path(self.mlp_channels(self.norm2(x)))
return x
class PatchEmbed(TimmPatchEmbed):
def forward(self, x):
x = self.proj(x)
if self.flatten:
x = x.flatten(2).transpose(1, 2) # BCHW -> BNC
else:
x = x.permute(0, 2, 3, 1) # BCHW -> BHWC
x = self.norm(x)
return x
class Shuffle(nn.Module):
def __init__(self):
super().__init__()
def forward(self, x):
if self.training:
B, H, W, C = x.shape
r = torch.randperm(H * W)
x = x.reshape(B, -1, C)
x = x[:, r, :].reshape(B, H, W, -1)
return x
class Downsample2D(nn.Module):
def __init__(self, input_dim, output_dim, patch_size):
super().__init__()
self.down = nn.Conv2d(input_dim, output_dim, kernel_size=patch_size, stride=patch_size)
def forward(self, x):
x = x.permute(0, 3, 1, 2)
x = self.down(x)
x = x.permute(0, 2, 3, 1)
return x
class Sequencer2D(nn.Module):
def __init__(
self,
num_classes=1000,
img_size=224,
in_chans=3,
global_pool='avg',
layers=[4, 3, 8, 3],
patch_sizes=[7, 2, 1, 1],
embed_dims=[192, 384, 384, 384],
hidden_sizes=[48, 96, 96, 96],
mlp_ratios=[3.0, 3.0, 3.0, 3.0],
block_layer=Sequencer2DBlock,
rnn_layer=LSTM2D,
mlp_layer=Mlp,
norm_layer=partial(nn.LayerNorm, eps=1e-6),
act_layer=nn.GELU,
num_rnn_layers=1,
bidirectional=True,
union="cat",
with_fc=True,
drop_rate=0.,
drop_path_rate=0.,
nlhb=False,
stem_norm=False,
):
super().__init__()
assert global_pool in ('', 'avg')
self.num_classes = num_classes
self.global_pool = global_pool
self.num_features = embed_dims[-1] # num_features for consistency with other models
self.feature_dim = -1 # channel dim index for feature outputs (rank 4, NHWC)
self.embed_dims = embed_dims
self.stem = PatchEmbed(
img_size=img_size, patch_size=patch_sizes[0], in_chans=in_chans,
embed_dim=embed_dims[0], norm_layer=norm_layer if stem_norm else None,
flatten=False)
self.blocks = nn.Sequential(*[
get_stage(
i, layers, patch_sizes, embed_dims, hidden_sizes, mlp_ratios, block_layer=block_layer,
rnn_layer=rnn_layer, mlp_layer=mlp_layer, norm_layer=norm_layer, act_layer=act_layer,
num_layers=num_rnn_layers, bidirectional=bidirectional,
union=union, with_fc=with_fc, drop=drop_rate, drop_path_rate=drop_path_rate,
)
for i, _ in enumerate(embed_dims)])
self.norm = norm_layer(embed_dims[-1])
self.head = nn.Linear(embed_dims[-1], self.num_classes) if num_classes > 0 else nn.Identity()
self.init_weights(nlhb=nlhb)
def init_weights(self, nlhb=False):
head_bias = -math.log(self.num_classes) if nlhb else 0.
named_apply(partial(_init_weights, head_bias=head_bias), module=self) # depth-first
@torch.jit.ignore
def group_matcher(self, coarse=False):
return dict(
stem=r'^stem',
blocks=[
(r'^blocks\.(\d+)\..*\.down', (99999,)),
(r'^blocks\.(\d+)', None) if coarse else (r'^blocks\.(\d+)\.(\d+)', None),
(r'^norm', (99999,))
]
)
@torch.jit.ignore
def set_grad_checkpointing(self, enable=True):
assert not enable, 'gradient checkpointing not supported'
@torch.jit.ignore
def get_classifier(self):
return self.head
def reset_classifier(self, num_classes, global_pool=None):
self.num_classes = num_classes
if global_pool is not None:
assert global_pool in ('', 'avg')
self.global_pool = global_pool
self.head = nn.Linear(self.embed_dim, num_classes) if num_classes > 0 else nn.Identity()
def forward_features(self, x):
x = self.stem(x)
x = self.blocks(x)
x = self.norm(x)
return x
def forward_head(self, x, pre_logits: bool = False):
if self.global_pool == 'avg':
x = x.mean(dim=(1, 2))
return x if pre_logits else self.head(x)
def forward(self, x):
x = self.forward_features(x)
x = self.forward_head(x)
return x
def _create_sequencer2d(variant, pretrained=False, **kwargs):
if kwargs.get('features_only', None):
raise RuntimeError('features_only not implemented for Sequencer2D models.')
model = build_model_with_cfg(Sequencer2D, variant, pretrained, **kwargs)
return model
# main
@register_model
def sequencer2d_s(pretrained=False, **kwargs):
model_args = dict(
layers=[4, 3, 8, 3],
patch_sizes=[7, 2, 1, 1],
embed_dims=[192, 384, 384, 384],
hidden_sizes=[48, 96, 96, 96],
mlp_ratios=[3.0, 3.0, 3.0, 3.0],
rnn_layer=LSTM2D,
bidirectional=True,
union="cat",
with_fc=True,
**kwargs)
model = _create_sequencer2d('sequencer2d_s', pretrained=pretrained, **model_args)
return model
@register_model
def sequencer2d_m(pretrained=False, **kwargs):
model_args = dict(
layers=[4, 3, 14, 3],
patch_sizes=[7, 2, 1, 1],
embed_dims=[192, 384, 384, 384],
hidden_sizes=[48, 96, 96, 96],
mlp_ratios=[3.0, 3.0, 3.0, 3.0],
rnn_layer=LSTM2D,
bidirectional=True,
union="cat",
with_fc=True,
**kwargs)
model = _create_sequencer2d('sequencer2d_m', pretrained=pretrained, **model_args)
return model
@register_model
def sequencer2d_l(pretrained=False, **kwargs):
model_args = dict(
layers=[8, 8, 16, 4],
patch_sizes=[7, 2, 1, 1],
embed_dims=[192, 384, 384, 384],
hidden_sizes=[48, 96, 96, 96],
mlp_ratios=[3.0, 3.0, 3.0, 3.0],
rnn_layer=LSTM2D,
bidirectional=True,
union="cat",
with_fc=True,
**kwargs)
model = _create_sequencer2d('sequencer2d_l', pretrained=pretrained, **model_args)
return model
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