Implement the davit model from https://arxiv.org/abs/2204.03645 and https://github.com/dingmyu/davit
pull/1583/head
Fredo Guan 2 years ago committed by GitHub
parent da6644b6ba
commit 3bd96609c8
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@ -8,6 +8,7 @@ from .convmixer import *
from .convnext import *
from .crossvit import *
from .cspnet import *
from .davit import *
from .deit import *
from .densenet import *
from .dla import *

@ -0,0 +1,624 @@
""" DaViT: Dual Attention Vision Transformers
As described in https://arxiv.org/abs/2204.03645
Input size invariant transformer architecture that combines channel and spacial
attention in each block. The attention mechanisms used are linear in complexity.
DaViT model defs and weights adapted from https://github.com/dingmyu/davit, original copyright below
"""
# Copyright (c) 2022 Mingyu Ding
# All rights reserved.
# This source code is licensed under the MIT license
import itertools
from typing import Tuple
import torch
import torch.nn as nn
import torch.nn.functional as F
from .helpers import build_model_with_cfg
from timm.data import IMAGENET_DEFAULT_MEAN, IMAGENET_DEFAULT_STD
from .layers import DropPath, to_2tuple, trunc_normal_, SelectAdaptivePool2d, ClassifierHead, Mlp
from collections import OrderedDict
import torch.utils.checkpoint as checkpoint
from .pretrained import generate_default_cfgs
from .registry import register_model
__all__ = ['DaViT']
class MySequential(nn.Sequential):
def forward(self, *inputs):
for module in self._modules.values():
if type(inputs) == tuple:
inputs = module(*inputs)
else:
inputs = module(inputs)
return inputs
class ConvPosEnc(nn.Module):
def __init__(self, dim, k=3, act=False, normtype=False):
super(ConvPosEnc, self).__init__()
self.proj = nn.Conv2d(dim,
dim,
to_2tuple(k),
to_2tuple(1),
to_2tuple(k // 2),
groups=dim)
self.normtype = normtype
if self.normtype == 'batch':
self.norm = nn.BatchNorm2d(dim)
elif self.normtype == 'layer':
self.norm = nn.LayerNorm(dim)
self.activation = nn.GELU() if act else nn.Identity()
def forward(self, x, size: Tuple[int, int]):
B, N, C = x.shape
H, W = size
assert N == H * W
feat = x.transpose(1, 2).view(B, C, H, W)
feat = self.proj(feat)
if self.normtype == 'batch':
feat = self.norm(feat).flatten(2).transpose(1, 2)
elif self.normtype == 'layer':
feat = self.norm(feat.flatten(2).transpose(1, 2))
else:
feat = feat.flatten(2).transpose(1, 2)
x = x + self.activation(feat)
return x
class PatchEmbed(nn.Module):
""" Size-agnostic implementation of 2D image to patch embedding,
allowing input size to be adjusted during model forward operation
"""
def __init__(
self,
patch_size=16,
in_chans=3,
embed_dim=96,
overlapped=False):
super().__init__()
patch_size = to_2tuple(patch_size)
self.patch_size = patch_size
if patch_size[0] == 4:
self.proj = nn.Conv2d(
in_chans,
embed_dim,
kernel_size=(7, 7),
stride=patch_size,
padding=(3, 3))
self.norm = nn.LayerNorm(embed_dim)
if patch_size[0] == 2:
kernel = 3 if overlapped else 2
pad = 1 if overlapped else 0
self.proj = nn.Conv2d(
in_chans,
embed_dim,
kernel_size=to_2tuple(kernel),
stride=patch_size,
padding=to_2tuple(pad))
self.norm = nn.LayerNorm(in_chans)
def forward(self, x, size):
H, W = size
dim = len(x.shape)
if dim == 3:
B, HW, C = x.shape
x = self.norm(x)
x = x.reshape(B,
H,
W,
C).permute(0, 3, 1, 2).contiguous()
B, C, H, W = x.shape
if W % self.patch_size[1] != 0:
x = F.pad(x, (0, self.patch_size[1] - W % self.patch_size[1]))
if H % self.patch_size[0] != 0:
x = F.pad(x, (0, 0, 0, self.patch_size[0] - H % self.patch_size[0]))
x = self.proj(x)
newsize = (x.size(2), x.size(3))
x = x.flatten(2).transpose(1, 2)
if dim == 4:
x = self.norm(x)
return x, newsize
class ChannelAttention(nn.Module):
def __init__(self, dim, num_heads=8, qkv_bias=False):
super().__init__()
self.num_heads = num_heads
head_dim = dim // num_heads
self.scale = head_dim ** -0.5
self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias)
self.proj = nn.Linear(dim, dim)
def forward(self, x):
B, N, C = x.shape
qkv = self.qkv(x).reshape(B, N, 3, self.num_heads, C // self.num_heads).permute(2, 0, 3, 1, 4)
q, k, v = qkv[0], qkv[1], qkv[2]
k = k * self.scale
attention = k.transpose(-1, -2) @ v
attention = attention.softmax(dim=-1)
x = (attention @ q.transpose(-1, -2)).transpose(-1, -2)
x = x.transpose(1, 2).reshape(B, N, C)
x = self.proj(x)
return x
class ChannelBlock(nn.Module):
def __init__(self, dim, num_heads, mlp_ratio=4., qkv_bias=False,
drop_path=0., act_layer=nn.GELU, norm_layer=nn.LayerNorm,
ffn=True, cpe_act=False):
super().__init__()
self.cpe = nn.ModuleList([ConvPosEnc(dim=dim, k=3, act=cpe_act),
ConvPosEnc(dim=dim, k=3, act=cpe_act)])
self.ffn = ffn
self.norm1 = norm_layer(dim)
self.attn = ChannelAttention(dim, num_heads=num_heads, qkv_bias=qkv_bias)
self.drop_path = DropPath(drop_path) if drop_path > 0. else nn.Identity()
if self.ffn:
self.norm2 = norm_layer(dim)
mlp_hidden_dim = int(dim * mlp_ratio)
self.mlp = Mlp(
in_features=dim,
hidden_features=mlp_hidden_dim,
act_layer=act_layer)
def forward(self, x, size):
x = self.cpe[0](x, size)
cur = self.norm1(x)
cur = self.attn(cur)
x = x + self.drop_path(cur)
x = self.cpe[1](x, size)
if self.ffn:
x = x + self.drop_path(self.mlp(self.norm2(x)))
return x, size
def window_partition(x, window_size: int):
"""
Args:
x: (B, H, W, C)
window_size (int): window size
Returns:
windows: (num_windows*B, window_size, window_size, C)
"""
B, H, W, C = x.shape
x = x.view(B, H // window_size, window_size, W // window_size, window_size, C)
windows = x.permute(0, 1, 3, 2, 4, 5).contiguous().view(-1, window_size, window_size, C)
return windows
def window_reverse(windows, window_size: int, H: int, W: int):
"""
Args:
windows: (num_windows*B, window_size, window_size, C)
window_size (int): Window size
H (int): Height of image
W (int): Width of image
Returns:
x: (B, H, W, C)
"""
B = int(windows.shape[0] / (H * W / window_size / window_size))
x = windows.view(B, H // window_size, W // window_size, window_size, window_size, -1)
x = x.permute(0, 1, 3, 2, 4, 5).contiguous().view(B, H, W, -1)
return x
class WindowAttention(nn.Module):
r""" Window based multi-head self attention (W-MSA) module with relative position bias.
It supports both of shifted and non-shifted window.
Args:
dim (int): Number of input channels.
window_size (tuple[int]): The height and width of the window.
num_heads (int): Number of attention heads.
qkv_bias (bool, optional): If True, add a learnable bias to query, key, value. Default: True
"""
def __init__(self, dim, window_size, num_heads, qkv_bias=True):
super().__init__()
self.dim = dim
self.window_size = window_size
self.num_heads = num_heads
head_dim = dim // num_heads
self.scale = head_dim ** -0.5
self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias)
self.proj = nn.Linear(dim, dim)
self.softmax = nn.Softmax(dim=-1)
def forward(self, x):
B_, N, C = x.shape
qkv = self.qkv(x).reshape(B_, N, 3, self.num_heads, C // self.num_heads).permute(2, 0, 3, 1, 4)
q, k, v = qkv[0], qkv[1], qkv[2]
q = q * self.scale
attn = (q @ k.transpose(-2, -1))
attn = self.softmax(attn)
x = (attn @ v).transpose(1, 2).reshape(B_, N, C)
x = self.proj(x)
return x
class SpatialBlock(nn.Module):
r""" Windows Block.
Args:
dim (int): Number of input channels.
num_heads (int): Number of attention heads.
window_size (int): Window size.
mlp_ratio (float): Ratio of mlp hidden dim to embedding dim.
qkv_bias (bool, optional): If True, add a learnable bias to query, key, value. Default: True
drop_path (float, optional): Stochastic depth rate. Default: 0.0
act_layer (nn.Module, optional): Activation layer. Default: nn.GELU
norm_layer (nn.Module, optional): Normalization layer. Default: nn.LayerNorm
"""
def __init__(self, dim, num_heads, window_size=7,
mlp_ratio=4., qkv_bias=True, drop_path=0.,
act_layer=nn.GELU, norm_layer=nn.LayerNorm,
ffn=True, cpe_act=False):
super().__init__()
self.dim = dim
self.ffn = ffn
self.num_heads = num_heads
self.window_size = window_size
self.mlp_ratio = mlp_ratio
self.cpe = nn.ModuleList([ConvPosEnc(dim=dim, k=3, act=cpe_act),
ConvPosEnc(dim=dim, k=3, act=cpe_act)])
self.norm1 = norm_layer(dim)
self.attn = WindowAttention(
dim,
window_size=to_2tuple(self.window_size),
num_heads=num_heads,
qkv_bias=qkv_bias)
self.drop_path = DropPath(drop_path) if drop_path > 0. else nn.Identity()
if self.ffn:
self.norm2 = norm_layer(dim)
mlp_hidden_dim = int(dim * mlp_ratio)
self.mlp = Mlp(
in_features=dim,
hidden_features=mlp_hidden_dim,
act_layer=act_layer)
def forward(self, x, size):
H, W = size
B, L, C = x.shape
assert L == H * W, "input feature has wrong size"
shortcut = self.cpe[0](x, size)
x = self.norm1(shortcut)
x = x.view(B, H, W, C)
pad_l = pad_t = 0
pad_r = (self.window_size - W % self.window_size) % self.window_size
pad_b = (self.window_size - H % self.window_size) % self.window_size
x = F.pad(x, (0, 0, pad_l, pad_r, pad_t, pad_b))
_, Hp, Wp, _ = x.shape
x_windows = window_partition(x, self.window_size)
x_windows = x_windows.view(-1, self.window_size * self.window_size, C)
# W-MSA/SW-MSA
attn_windows = self.attn(x_windows)
# merge windows
attn_windows = attn_windows.view(-1,
self.window_size,
self.window_size,
C)
x = window_reverse(attn_windows, self.window_size, Hp, Wp)
if pad_r > 0 or pad_b > 0:
x = x[:, :H, :W, :].contiguous()
x = x.view(B, H * W, C)
x = shortcut + self.drop_path(x)
x = self.cpe[1](x, size)
if self.ffn:
x = x + self.drop_path(self.mlp(self.norm2(x)))
return x, size
class DaViT(nn.Module):
r""" Dual Attention Transformer
Args:
patch_size (int | tuple(int)): Patch size. Default: 4
in_chans (int): Number of input image channels. Default: 3
embed_dims (tuple(int)): Patch embedding dimension. Default: (64, 128, 192, 256)
num_heads (tuple(int)): Number of attention heads in different layers. Default: (4, 8, 12, 16)
window_size (int): Window size. Default: 7
mlp_ratio (float): Ratio of mlp hidden dim to embedding dim. Default: 4
qkv_bias (bool): If True, add a learnable bias to query, key, value. Default: True
drop_path_rate (float): Stochastic depth rate. Default: 0.1
norm_layer (nn.Module): Normalization layer. Default: nn.LayerNorm.
"""
def __init__(
self,
in_chans=3,
depths=(1, 1, 3, 1),
patch_size=4,
embed_dims=(96, 192, 384, 768),
num_heads=(3, 6, 12, 24),
window_size=7,
mlp_ratio=4.,
qkv_bias=True,
drop_path_rate=0.1,
norm_layer=nn.LayerNorm,
attention_types=('spatial', 'channel'),
ffn=True,
overlapped_patch=False,
cpe_act=False,
drop_rate=0.,
attn_drop_rate=0.,
img_size=224,
num_classes=1000,
global_pool='avg'
):
super().__init__()
architecture = [[index] * item for index, item in enumerate(depths)]
self.architecture = architecture
self.embed_dims = embed_dims
self.num_heads = num_heads
self.num_stages = len(self.embed_dims)
dpr = [x.item() for x in torch.linspace(0, drop_path_rate, 2 * len(list(itertools.chain(*self.architecture))))]
assert self.num_stages == len(self.num_heads) == (sorted(list(itertools.chain(*self.architecture)))[-1] + 1)
self.num_classes = num_classes
self.num_features = embed_dims[-1]
self.drop_rate=drop_rate
self.grad_checkpointing = False
self.patch_embeds = nn.ModuleList([
PatchEmbed(patch_size=patch_size if i == 0 else 2,
in_chans=in_chans if i == 0 else self.embed_dims[i - 1],
embed_dim=self.embed_dims[i],
overlapped=overlapped_patch)
for i in range(self.num_stages)])
main_blocks = []
for block_id, block_param in enumerate(self.architecture):
layer_offset_id = len(list(itertools.chain(*self.architecture[:block_id])))
block = nn.ModuleList([
MySequential(*[
ChannelBlock(
dim=self.embed_dims[item],
num_heads=self.num_heads[item],
mlp_ratio=mlp_ratio,
qkv_bias=qkv_bias,
drop_path=dpr[2 * (layer_id + layer_offset_id) + attention_id],
norm_layer=nn.LayerNorm,
ffn=ffn,
cpe_act=cpe_act
) if attention_type == 'channel' else
SpatialBlock(
dim=self.embed_dims[item],
num_heads=self.num_heads[item],
mlp_ratio=mlp_ratio,
qkv_bias=qkv_bias,
drop_path=dpr[2 * (layer_id + layer_offset_id) + attention_id],
norm_layer=nn.LayerNorm,
ffn=ffn,
cpe_act=cpe_act,
window_size=window_size,
) if attention_type == 'spatial' else None
for attention_id, attention_type in enumerate(attention_types)]
) for layer_id, item in enumerate(block_param)
])
main_blocks.append(block)
self.main_blocks = nn.ModuleList(main_blocks)
'''
# layer norms for pyramid feature extraction
#
# TODO implement pyramid feature extraction
#
# davit should be a good transformer candidate, since the only official implementation
# is for segmentation and detection
for i_layer in range(self.num_stages):
layer = norm_layer(self.embed_dims[i_layer])
layer_name = f'norm{i_layer}'
self.add_module(layer_name, layer)
'''
self.norms = norm_layer(self.num_features)
self.head = ClassifierHead(self.num_features, num_classes, pool_type=global_pool, drop_rate=drop_rate)
self.apply(self._init_weights)
def _init_weights(self, m):
if isinstance(m, nn.Linear):
trunc_normal_(m.weight, std=.02)
if isinstance(m, nn.Linear) and m.bias is not None:
nn.init.constant_(m.bias, 0)
elif isinstance(m, nn.LayerNorm):
nn.init.constant_(m.bias, 0)
nn.init.constant_(m.weight, 1.0)
@torch.jit.ignore
def set_grad_checkpointing(self, enable=True):
self.grad_checkpointing = enable
@torch.jit.ignore
def get_classifier(self):
return self.head.fc
def reset_classifier(self, num_classes, global_pool=None):
self.num_classes = num_classes
if global_pool is None:
global_pool = self.head.global_pool.pool_type
self.head = ClassifierHead(self.num_features, num_classes, pool_type=global_pool, drop_rate=self.drop_rate)
def forward_features_full(self, x):
x, size = self.patch_embeds[0](x, (x.size(2), x.size(3)))
features = [x]
sizes = [size]
branches = [0]
for block_index, block_param in enumerate(self.architecture):
branch_ids = sorted(set(block_param))
for branch_id in branch_ids:
if branch_id not in branches:
x, size = self.patch_embeds[branch_id](features[-1], sizes[-1])
features.append(x)
sizes.append(size)
branches.append(branch_id)
for layer_index, branch_id in enumerate(block_param):
if self.grad_checkpointing and not torch.jit.is_scripting():
features[branch_id], _ = checkpoint.checkpoint(self.main_blocks[block_index][layer_index], features[branch_id], sizes[branch_id])
else:
features[branch_id], _ = self.main_blocks[block_index][layer_index](features[branch_id], sizes[branch_id])
'''
# pyramid feature norm logic, no weights for these extra norm layers from pretrained classification model
outs = []
for i in range(self.num_stages):
norm_layer = getattr(self, f'norm{i}')
x_out = norm_layer(features[i])
H, W = sizes[i]
out = x_out.view(-1, H, W, self.embed_dims[i]).permute(0, 3, 1, 2).contiguous()
outs.append(out)
'''
# non-normalized pyramid features + corresponding sizes
return tuple(features), tuple(sizes)
def forward_features(self, x):
x, sizes = self.forward_features_full(x)
# take final feature and norm
x = self.norms(x[-1])
H, W = sizes[-1]
x = x.view(-1, H, W, self.embed_dims[-1]).permute(0, 3, 1, 2).contiguous()
#print(x.shape)
return x
def forward_head(self, x, pre_logits: bool = False):
return self.head(x, pre_logits=pre_logits)
def forward(self, x):
x = self.forward_features(x)
x = self.forward_head(x)
return x
def checkpoint_filter_fn(state_dict, model):
""" Remap MSFT checkpoints -> timm """
if 'head.norm.weight' in state_dict:
return state_dict # non-MSFT checkpoint
if 'state_dict' in state_dict:
state_dict = state_dict['state_dict']
out_dict = {}
import re
for k, v in state_dict.items():
k = k.replace('head.', 'head.fc.')
out_dict[k] = v
return out_dict
def _create_davit(variant, pretrained=False, **kwargs):
model = build_model_with_cfg(DaViT, variant, pretrained,
pretrained_filter_fn=checkpoint_filter_fn, **kwargs)
return model
def _cfg(url='', **kwargs): # not sure how this should be set up
return {
'url': url,
'num_classes': 1000, 'input_size': (3, 224, 224), 'pool_size': (7, 7),
'crop_pct': 0.875, 'interpolation': 'bilinear',
'mean': IMAGENET_DEFAULT_MEAN, 'std': IMAGENET_DEFAULT_STD,
'first_conv': 'patch_embeds.0.proj', 'classifier': 'head.fc',
**kwargs
}
default_cfgs = generate_default_cfgs({
'davit_tiny.msft_in1k': _cfg(
url="https://github.com/fffffgggg54/pytorch-image-models/releases/download/checkpoint/davit_tiny_ed28dd55.pth.tar"),
'davit_small.msft_in1k': _cfg(
url="https://github.com/fffffgggg54/pytorch-image-models/releases/download/checkpoint/davit_small_d1ecf281.pth.tar"),
'davit_base.msft_in1k': _cfg(
url="https://github.com/fffffgggg54/pytorch-image-models/releases/download/checkpoint/davit_base_67d9ac26.pth.tar"),
})
@register_model
def davit_tiny(pretrained=False, **kwargs):
model_kwargs = dict(depths=(1, 1, 3, 1), embed_dims=(96, 192, 384, 768),
num_heads=(3, 6, 12, 24), **kwargs)
return _create_davit('davit_tiny', pretrained=pretrained, **model_kwargs)
@register_model
def davit_small(pretrained=False, **kwargs):
model_kwargs = dict(depths=(1, 1, 9, 1), embed_dims=(96, 192, 384, 768),
num_heads=(3, 6, 12, 24), **kwargs)
return _create_davit('davit_small', pretrained=pretrained, **model_kwargs)
@register_model
def davit_base(pretrained=False, **kwargs):
model_kwargs = dict(depths=(1, 1, 9, 1), embed_dims=(128, 256, 512, 1024),
num_heads=(4, 8, 16, 32), **kwargs)
return _create_davit('davit_base', pretrained=pretrained, **model_kwargs)
''' models without weights
# TODO contact authors to get larger pretrained models
@register_model
def davit_large(pretrained=False, **kwargs):
model_kwargs = dict(depths=(1, 1, 9, 1), embed_dims=(192, 384, 768, 1536),
num_heads=(6, 12, 24, 48), **kwargs)
return _create_davit('davit_large', pretrained=pretrained, **model_kwargs)
@register_model
def davit_huge(pretrained=False, **kwargs):
model_kwargs = dict(depths=(1, 1, 9, 1), embed_dims=(256, 512, 1024, 2048),
num_heads=(8, 16, 32, 64), **kwargs)
return _create_davit('davit_huge', pretrained=pretrained, **model_kwargs)
@register_model
def davit_giant(pretrained=False, **kwargs):
model_kwargs = dict(depths=(1, 1, 12, 3), embed_dims=(384, 768, 1536, 3072),
num_heads=(12, 24, 48, 96), **kwargs)
return _create_davit('davit_giant', pretrained=pretrained, **model_kwargs)
'''
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